RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 PSG1P11464 419 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 GPX4P36969 197 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-220ENST00000461409 TMBIM6P55061 237 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 OR8G2PQ6IF36 304 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 Q6ZTC4 211 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 CSNK1G2-AS1Q8NCQ2 148 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 RNF125Q96EQ8 232 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 RNF126Q9BV68 326 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 APLNQ9ULZ1 77 aa6.28□□□□□ -1.4
HDAC9-220ENST00000461409 IGHV4-4A0A075B6R2 117 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 DUXBA0A1W2PPF3 345 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 ZFP92A6NM28 416 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 H3BMM0 161 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 HLA-DRB4P13762 266 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 AKR1C4P17516 323 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 FAUP35544 74 aaKnown RBP6.27□□□□□ -1.41
HDAC9-220ENST00000461409 ID1P41134 155 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 NKX2-1P43699 371 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-220ENST00000461409 C1orf194Q5T5A4 169 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 SAMD13Q5VXD3 122 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 OR1S1Q8NH92 325 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 PBDC1Q9BVG4 233 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 RBKSQ9H477 322 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 XCL2Q9UBD3 114 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 HLA-DRB4X5D2U9 266 aa6.27□□□□□ -1.41
HDAC9-220ENST00000461409 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 TMEM189A5PLL7 270 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 SNRPGP15A8MWD9 76 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 AMBPP02760 352 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 PSMB3P49720 205 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 AP3S2P59780 193 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 RAB11AP62491 216 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 SUPT4H1P63272 117 aaKnown RBP6.26□□□□□ -1.41
HDAC9-220ENST00000461409 GAMTQ14353 236 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 SPATA31B1PQ5VZV4 182 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 LYZL2Q7Z4W2 148 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 COQ8AQ8NI60 647 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 PPP1R14BQ96C90 147 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 AGRNO00468 2067 aa6.26□□□□□ -1.41
HDAC9-220ENST00000461409 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 MED6O75586 246 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 CFDP00746 253 aaPredicted RBP6.25□□□□□ -1.41
HDAC9-220ENST00000461409 SPART-AS1P0CW21 52 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 P0DMU3 169 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 FAM231AP0DMU4 169 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 FAM231CP0DMU5 169 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 S100A7P31151 101 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 LYZP61626 148 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 RPP30P78346 268 aaKnown RBP6.25□□□□□ -1.41
HDAC9-220ENST00000461409 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 TMEM128Q5BJH2 165 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF705AQ6ZN79 300 aaPredicted RBP6.25□□□□□ -1.41
HDAC9-220ENST00000461409 FOXI2Q6ZQN5 318 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 TMED4Q7Z7H5 227 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 LINC00052Q96N35 136 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 CIB3Q96Q77 187 aaPredicted RBP6.25□□□□□ -1.41
HDAC9-220ENST00000461409 NEU1Q99519 415 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 TRGV9Q99603 122 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 SOSTQ9BQB4 213 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 NDUFAF3Q9BU61 184 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 SLIRPQ9GZT3 109 aaKnown RBP6.25□□□□□ -1.41
HDAC9-220ENST00000461409 TMPRSS5Q9H3S3 457 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 CELA1Q9UNI1 258 aa6.25□□□□□ -1.41
HDAC9-220ENST00000461409 IGKV1D-37A0A075B6S9 117 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF705FA8MVS1 300 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 ISLRO14498 428 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF705DP0CH99 300 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF705BP0CI00 300 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 SLC25A6P12236 298 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 TNFSF8P32971 234 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 MEOX2P50222 304 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF90Q03938 601 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 EBLN2Q6P2I7 272 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 LINC00336Q6ZUF6 198 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 OR8I2Q8N0Y5 310 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 LRTM2Q8N967 370 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 MCFD2Q8NI22 146 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 DEDD2Q8WXF8 326 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 SLC25A21Q9BQT8 299 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 WDR12Q9GZL7 423 aaKnown RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 SAV1Q9H4B6 383 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-220ENST00000461409 RFNGQ9Y644 331 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 VPS13DQ5THJ4 4388 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 DNAH10Q8IVF4 4471 aa6.24□□□□□ -1.41
HDAC9-220ENST00000461409 H3BMQ9 156 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 SOCS3O14543 225 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 PITX3O75364 302 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 IGKV3-20P01619 116 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 GALR1P47211 349 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 EMP1P54849 157 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 PSG9Q00887 426 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 OR2F1Q13607 317 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF79Q15937 498 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 PYDC2Q56P42 97 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms