RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GPER1Q99527 375 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 OR2J1Q9GZK6 312 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 C14orf132Q9NPU4 83 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 LYRM2Q9NU23 88 aaPredicted RBP1.16□□□□□ -2.22
VCL-203ENST00000461383 ACER3Q9NUN7 267 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 SS18L2Q9UHA2 77 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 KLK9Q9UKQ9 250 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 MUC6Q6W4X9 2439 aa1.16□□□□□ -2.22
VCL-203ENST00000461383 TMEM238C9JI98 176 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 RNASE4P34096 147 aaKnown RBP1.15□□□□□ -2.23
VCL-203ENST00000461383 GNG10P50151 68 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 GNG3P63215 75 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.15□□□□□ -2.23
VCL-203ENST00000461383 SOSTDC1Q6X4U4 206 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 CROCCP2Q86T23 111 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 CLECL1Q8IZS7 167 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 OR2T35Q8NGX2 323 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 NEK7Q8TDX7 302 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 MALSU1Q96EH3 234 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 SLC25A21Q9BQT8 299 aaPredicted RBP1.15□□□□□ -2.23
VCL-203ENST00000461383 LINC00467Q9BRT7 94 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 GINS3Q9BRX5 216 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 NPCDR1Q9BY65 106 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 SH3BGRL3Q9H299 93 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 RASL12Q9NYN1 266 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 PCTPQ9UKL6 214 aa1.15□□□□□ -2.23
VCL-203ENST00000461383 EIF3AQ14152 1382 aaKnown RBP1.15□□□□□ -2.23
VCL-203ENST00000461383 TRAV12-1A0A0B4J245 112 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 A8MWV9 139 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 LYZL6O75951 148 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 IFNA14P01570 189 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 PDE6HQ13956 83 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 LYG2Q86SG7 212 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 STX12Q86Y82 276 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 STX19Q8N4C7 294 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 SMIM20Q8N5G0 67 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 PPTC7Q8NI37 304 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 TMEM254Q8TBM7 123 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 C4orf3Q8WVX3 66 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 ZHX1-C8orf76Q96EF9 292 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 LYSMD1Q96S90 227 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 PRRT1Q99946 306 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 HOPXQ9BPY8 73 aaPredicted RBP1.14□□□□□ -2.23
VCL-203ENST00000461383 TMEM126AQ9H061 195 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 UFC1Q9Y3C8 167 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 V9GYQ6 96 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 NUP98P52948 1817 aa1.14□□□□□ -2.23
VCL-203ENST00000461383 A0A087WX48 190 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 TRBV6-8A0A0A6YYG3 113 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 CCDC160A6NGH7 325 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 TMEM256-PLSCR3K7ERE1 68 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 M0R378 163 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 HCRTO43612 131 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 ANGP03950 147 aaKnown RBP1.13□□□□□ -2.23
VCL-203ENST00000461383 LYNX1P0DP58 116 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 RNASE3P12724 160 aaKnown RBP1.13□□□□□ -2.23
VCL-203ENST00000461383 OGNP20774 298 aaKnown RBP1.13□□□□□ -2.23
VCL-203ENST00000461383 ZNF93P35789 620 aaPredicted RBP1.13□□□□□ -2.23
VCL-203ENST00000461383 DYNLT3P51808 116 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 VBP1P61758 197 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 DEFB113Q30KQ7 82 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 C3orf33Q6P1S2 294 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 EXOC3-AS1Q8N2X6 119 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 C3orf56Q8N813 242 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 ZNF714Q96N38 554 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 PBOV1Q9GZY1 135 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 BIN3Q9NQY0 253 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 LY96Q9Y6Y9 160 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 UHRF1BP1Q6BDS2 1440 aa1.13□□□□□ -2.23
VCL-203ENST00000461383 NCOA6Q14686 2063 aaPredicted RBP1.12□□□□□ -2.23
VCL-203ENST00000461383 IGKV2D-26A0A0A0MRZ7 120 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 HLA-EP13747 358 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 SERPINB1P30740 379 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 TEX261Q6UWH6 196 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 GRINAQ7Z429 371 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 FAM24BQ8N5W8 94 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 OR10K1Q8NGX5 313 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 OR4K15Q8NH41 348 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 ZNF418Q8TF45 676 aaPredicted RBP1.12□□□□□ -2.23
VCL-203ENST00000461383 DYDC1Q8WWB3 177 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 TEX37Q96LM6 180 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 POPDC3Q9HBV1 291 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 U3KQ87 197 aa1.12□□□□□ -2.23
VCL-203ENST00000461383 TNRC6BQ9UPQ9 1833 aaKnown RBP1.12□□□□□ -2.23
VCL-203ENST00000461383 SNRNP200O75643 2136 aaKnown RBP1.12□□□□□ -2.23
VCL-203ENST00000461383 N4BP2Q86UW6 1770 aaPredicted RBP1.11□□□□□ -2.23
VCL-203ENST00000461383 OTOGLQ3ZCN5 2332 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 ROCK1Q13464 1354 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 COL4A5P29400 1685 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 GEMIN2O14893 280 aaKnown RBP1.11□□□□□ -2.23
VCL-203ENST00000461383 MFSD11O43934 449 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 DHFRP00374 187 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 IDO1P14902 403 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 C1orf137Q5JT78 98 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 ST6GALNAC3Q8NDV1 305 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 MRPL57Q9BQC6 102 aaKnown RBP1.11□□□□□ -2.23
VCL-203ENST00000461383 SELENOSQ9BQE4 189 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 BOLA2Q9H3K6 86 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 MED11Q9P086 117 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 TECTAO75443 2155 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms