RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 RSPO3Q9BXY4 272 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 GFRA4Q9GZZ7 299 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 IL18BPO95998 194 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 SUPT4H1P63272 117 aaKnown RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF672Q499Z4 452 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 C14orf178Q8N769 122 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM141Q96I45 108 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 F5P12259 2224 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 B4DSR2 109 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 RHODO00212 210 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 C3orf79P0CE67 100 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF362Q5T0B9 420 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 SPXQ9BT56 116 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 IGKV1-9A0A0C4DH69 117 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 MPV17L2Q567V2 206 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 TCTEX1D4Q5JR98 221 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 LIME1Q9H400 295 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 LINC00527Q9UJ94 153 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 KIAA0100Q14667 2235 aaKnown RBP7.38□□□□□ -1.23
BRCA1-205ENST00000461221 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 SRRM5B3KS81 715 aa7.38□□□□□ -1.23
BRCA1-205ENST00000461221 IGLV3-12A0A075B6K2 115 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 LYNX1G3V0Z9 82 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 LYNX1P0DP58 116 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 MRAPQ8TCY5 172 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 MYO16Q9Y6X6 1858 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 COLCA2A8K830 154 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 MMP23AO75900 390 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 PMVKQ15126 192 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 PIP4P2Q8N4L2 257 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 SCN4AP35499 1836 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 C5orf64Q2M2E5 130 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM200BQ69YZ2 307 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 SRSF8Q9BRL6 282 aaKnown RBP7.37□□□□□ -1.23
BRCA1-205ENST00000461221 FXYD7P58549 80 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 GLI3P10071 1580 aa7.37□□□□□ -1.23
BRCA1-205ENST00000461221 TGFBR3LH3BV60 316 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 DNAJC13O75165 2243 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 IGLV3-19P01714 112 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 CSRP1P21291 193 aaKnown RBP7.36□□□□□ -1.23
BRCA1-205ENST00000461221 RMI2Q96E14 147 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 SPANXCQ9NY87 97 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM219Q86XT9 240 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 SCN8AQ9UQD0 1980 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 A0A0A6YYD4 124 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 GAGE12BA1L429 117 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 FNDC10F2Z333 226 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 EREGO14944 169 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 TFF1P04155 84 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 C10orf55Q5SWW7 151 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM14EPQ6UXP3 125 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 BMPERQ8N8U9 685 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 KLHL30-AS1Q8NEE0 82 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 DICER1Q9UPY3 1922 aaKnown RBP7.36□□□□□ -1.23
BRCA1-205ENST00000461221 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 IGHG3P01860 377 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 CSRP3P50461 194 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 UBE2E2Q96LR5 201 aa7.36□□□□□ -1.23
BRCA1-205ENST00000461221 ADAMTSL3P82987 1691 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 H0YJW9 148 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM178BH3BS89 294 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 H3BUX3 64 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 TRACP01848 142 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 CRYGSP22914 178 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 FOXF2Q12947 444 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 PDE6HQ13956 83 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 IL17RELQ6ZVW7 336 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 Q8TAT8 98 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 Q86TA4 180 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 SPRR3Q9UBC9 169 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 SHANK3Q9BYB0 1731 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 NDPQ00604 133 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 CFHR1Q03591 330 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 LCNL1Q6ZST4 164 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 PAQR4Q8N4S7 273 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-205ENST00000461221 DAZ1Q9NQZ3 744 aaKnown RBP7.35□□□□□ -1.23
BRCA1-205ENST00000461221 A0A087WWL8 130 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 TMEM258P61165 79 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 PPDPFLQ8WWR9 84 aa7.35□□□□□ -1.23
BRCA1-205ENST00000461221 EPOPA6NHQ4 379 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 NMSQ5H8A3 153 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 GLRX5Q86SX6 157 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 ZCCHC24Q8N2G6 241 aaKnown RBP7.34□□□□□ -1.23
BRCA1-205ENST00000461221 DSCR8Q96T75 97 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 MYO7AQ13402 2215 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 KLRD1Q13241 179 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 LHFPL1Q86WI0 220 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 CITED1Q99966 193 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 TCF15Q12870 199 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 STRCQ7RTU9 1775 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 BUB1B-PAK6H3BSN5 160 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 SLC25A16P16260 332 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 HAMPP81172 84 aa7.34□□□□□ -1.23
BRCA1-205ENST00000461221 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms