RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 LHBP01229 141 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 HLA-DRB1P01911 266 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 HBE1P02100 147 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 APOHP02749 345 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 IGHV4-31P0DP07 118 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 PTHLHP12272 177 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 TSPOP30536 169 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 DUTP33316 252 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 CNN1P51911 297 aaKnown RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 ATP1B3P54709 279 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 GNG3P63215 75 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 HIST1H1AQ02539 215 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM267Q0VDI3 215 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 MMDQ15546 238 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 Q499Y3 187 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM128Q5BJH2 165 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 UFSP1Q6NVU6 142 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 DPPA3Q6W0C5 159 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 SIGLEC15Q6ZMC9 328 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 Q6ZN92 141 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 FOXI2Q6ZQN5 318 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 DEFB125Q8N687 156 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 C5orf17Q8NAS9 161 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM229BQ8NBD8 167 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 OR52B4Q8NGK2 314 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 MRAPQ8TCY5 172 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 DERL3Q96Q80 235 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 DCTN5Q9BTE1 182 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 RTL8AQ9BWD3 113 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 PSG8Q9UQ74 426 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 MPC1Q9Y5U8 109 aa3.83□□□□□ -1.8
ATPAF1-203ENST00000460928 IGKV1D-17A0A075B6S4 117 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 TRAV9-1A0A075B6T8 112 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 A0A1W2PS18 150 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 A6NDN8 102 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 E5RGE8 158 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 CCL24O00175 119 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 HSD17B6O14756 317 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 AGPAT2O15120 278 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF207O43670 478 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 HYPMO75409 117 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 SRP19P09132 144 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 WNT2P09544 360 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 AREGP15514 252 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 SRP14P37108 136 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 DSCR9P59020 149 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 KISS1Q15726 138 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 PIGYQ3MUY2 71 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 UTF1Q5T230 341 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 UNQ5815/PRO19632Q6UWF5 114 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 H2BFWTQ7Z2G1 175 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF429Q86V71 674 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 SLC25A42Q86VD7 318 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 OR8I2Q8N0Y5 310 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 CD177Q8N6Q3 437 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 TPRX1Q8N7U7 411 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNRF1Q8ND25 227 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 OR4C16Q8NGL9 310 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 OR1B1Q8NGR6 318 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 TMEM158Q8WZ71 300 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 BORCS8Q96FH0 119 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 C18orf12Q96KH6 178 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 GPER1Q99527 375 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 P2RX4Q99571 388 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 C20orf24Q9BUV8 137 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 PARLQ9H300 379 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 ZNF665Q9H7R5 613 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 FOXA2Q9Y261 457 aaPredicted RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 NOP16Q9Y3C1 178 aaKnown RBP3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 PPIAL4AQ9Y536 164 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 DSCAML1Q8TD84 2053 aa3.82□□□□□ -1.8
ATPAF1-203ENST00000460928 A0A1W2PRD5 423 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 A0A1W2PRF3 423 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 A0A1W2PRM7 423 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 PSMB11A5LHX3 300 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 RBFOX3A6NFN3 312 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SRRM5B3KS81 715 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 J3QT63 122 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SIVA1O15304 175 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SNAI2O43623 268 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 CRYGBP07316 175 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SLC25A16P16260 332 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 TCTAP57738 103 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SEC11AP67812 179 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 LOXL1Q08397 574 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 GNMTQ14749 295 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 ANKRD55Q3KP44 614 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 SPATA45Q537H7 98 aa3.81□□□□□ -1.8
ATPAF1-203ENST00000460928 STUMQ69YW2 141 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms