RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	REL	Q04864	619 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	SLC38A11	Q08AI6	406 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR2F1	Q13607	317 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	DEFB136	Q30KP8	78 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	LRRC37A5P	Q49AS3	106 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	FAM106A	Q4KMX7	169 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	ACSM6	Q6P461	480 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	TOMM20L	Q6UXN7	152 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	ADAMTSL5	Q6ZMM2	481 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF600	Q6ZNG1	722 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	STX12	Q86Y82	276 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	KCNRG	Q8N5I3	272 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR5C1	Q8NGR4	320 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM190	Q8WZ59	177 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	DLX4	Q92988	240 aa	Predicted RBP	4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM147	Q9BVK8	224 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	WFDC1	Q9HC57	220 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	MRPL27	Q9P0M9	148 aa	Known RBP	4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731		S4R3C0	116 aa		4.27	□□□□□ -1.73
PTPN12-209	ENST00000460731	IGHV3-21	A0A0B4J1V1	117 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731		A0A0D9SG52	128 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM213	A2RRL7	107 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	PPP5D1	E7EU14	171 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	TAAR5	O14804	337 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	DFFB	O76075	338 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	IGHV3-23	P01764	117 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CSN3	P07498	182 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	RD3L	P0DJH9	198 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	PSG1	P11464	419 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CXCL2	P19875	107 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CRYBB3	P26998	211 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	RPL29	P47914	159 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	INSL3	P51460	131 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF90	Q03938	601 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CD300C	Q08708	224 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	RPEL1	Q2QD12	228 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	NSUN5P1	Q3KNT7	163 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	TIGIT	Q495A1	244 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731		Q56UQ5	140 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	PXDC1	Q5TGL8	231 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	LAMTOR1	Q6IAA8	161 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR8G2P	Q6IF36	304 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	UNQ9165/PRO28630	Q6UXU0	137 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	AKAP14	Q86UN6	197 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM217	Q8N7C4	229 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	UBAC2	Q8NBM4	344 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR9G4	Q8NGQ1	327 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	MARC2	Q969Z3	335 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	SLC35E1	Q96K37	410 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	HYLS1	Q96M11	299 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CLUHP3	Q96NS8	147 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR5B12	Q96R08	314 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	MGST2	Q99735	147 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	ATP5S	Q99766	215 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	WDR61	Q9GZS3	305 aa	Known RBP	4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	MFF	Q9GZY8	342 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	VSIR	Q9H7M9	311 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	CYTL1	Q9NRR1	136 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	UQCC1	Q9NVA1	299 aa		4.26	□□□□□ -1.73
PTPN12-209	ENST00000460731	C2orf70	A6NJV1	201 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	SMLR1	H3BR10	107 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	OVOL1	O14753	267 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	AGPAT2	O15120	278 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	SCGB2A1	O75556	95 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	FABP1	P07148	127 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	CBLN1	P23435	193 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	SYNJ2BP	P57105	145 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	EGFEM1P	Q0D2K5	195 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	OPCML	Q14982	345 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	KPRP	Q5T749	579 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	FAM90A2P	Q658T7	463 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	BTNL8	Q6UX41	500 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	CYP2G1P	Q6ZSU1	146 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR51G1	Q8NGK1	321 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731		Q8WTZ3	238 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	ACY3	Q96HD9	319 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	DUX3	Q96PT4	197 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	MCRIP2	Q9BUT9	160 aa	Known RBP	4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	GGTLC1	Q9BX51	225 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	DAZ1	Q9NQZ3	744 aa	Known RBP	4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZC4H2	Q9NQZ6	224 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	FBXL17	Q9UF56	701 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	SMPX	Q9UHP9	88 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	UFC1	Q9Y3C8	167 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	TIMM9	Q9Y5J7	89 aa		4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
PTPN12-209	ENST00000460731	DNAH3	Q8TD57	4116 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	hCG_2014768	A0A024R1R8	64 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	FXYD6-FXYD2	A0A087WZ82	144 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZFP92	A6NM28	416 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	ARPC5	O15511	151 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	BUB3	O43684	328 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	JTB	O76095	146 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	YIF1A	O95070	293 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	IGLV1-51	P01701	117 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	CD5	P06127	495 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	FOLR2	P14207	255 aa		4.24	□□□□□ -1.73

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