RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CHRDL1Q9BU40 450 aa13.51□□□□□ -0.25
CDK11A-209ENST00000460465 SCO2A0A1W2PP80 73 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
CDK11A-209ENST00000460465 ADMP35318 185 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 RHEBQ15382 184 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 LINC00518Q8N0U6 118 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 FXYD5Q96DB9 178 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 CCDC140Q96MF4 163 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 HOXA3O43365 443 aaPredicted RBP13.5□□□□□ -0.25
CDK11A-209ENST00000460465 OR2C1O95371 312 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 TRGV3P03979 118 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 STXBP6Q8NFX7 210 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 PRDM13Q9H4Q3 707 aa13.5□□□□□ -0.25
CDK11A-209ENST00000460465 CREBBPQ92793 2442 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 FAM223BA6NKX1 122 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 NDUFB4O95168 129 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 ATP5G2Q06055 141 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 KRTAP1-1Q07627 177 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 USF2Q15853 346 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-209ENST00000460465 FAM223AQ8IWN6 122 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 SDF2L1Q9HCN8 221 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 ZNF469Q96JG9 3925 aaPredicted RBP13.49□□□□□ -0.25
CDK11A-209ENST00000460465 TEX15Q9BXT5 2789 aa13.49□□□□□ -0.25
CDK11A-209ENST00000460465 CLEC3BP05452 202 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 SNRPCP09234 159 aaKnown RBP13.48□□□□□ -0.25
CDK11A-209ENST00000460465 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 NAT8Q9UHE5 227 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 TRBV7-1A0A0A6YYK4 115 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 GGTLC3B5MD39 225 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 H3BRN7 92 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 GP9P14770 177 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 TPPP2P59282 170 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 S100A12P80511 92 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 TMEM95Q3KNT9 176 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 SHANK2-AS3Q9BTD1 123 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
CDK11A-209ENST00000460465 SAV1Q9H4B6 383 aaPredicted RBP13.48□□□□□ -0.25
CDK11A-209ENST00000460465 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
CDK11A-209ENST00000460465 TMEM241Q24JQ0 296 aa13.47□□□□□ -0.25
CDK11A-209ENST00000460465 TEX29Q8N6K0 151 aa13.47□□□□□ -0.25
CDK11A-209ENST00000460465 GAR1Q9NY12 217 aaKnown RBP13.47□□□□□ -0.25
CDK11A-209ENST00000460465 H3BUA1 57 aa13.47□□□□□ -0.25
CDK11A-209ENST00000460465 ZNF414Q96IQ9 312 aa13.47□□□□□ -0.25
CDK11A-209ENST00000460465 UNC79Q9P2D8 2635 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 IGHV3-35A0A0C4DH35 117 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 BRI3O95415 125 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 SUMO1P63165 101 aaKnown RBP13.46□□□□□ -0.25
CDK11A-209ENST00000460465 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 SIGLECL1Q8N7X8 197 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 C11orf52Q96A22 123 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 GNB4Q9HAV0 340 aa13.46□□□□□ -0.25
CDK11A-209ENST00000460465 CD5LO43866 347 aa13.46□□□□□ -0.26
CDK11A-209ENST00000460465 FLI1Q01543 452 aaPredicted RBP13.46□□□□□ -0.26
CDK11A-209ENST00000460465 CFHR3Q02985 330 aa13.46□□□□□ -0.26
CDK11A-209ENST00000460465 BLNKQ8WV28 456 aa13.46□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF580Q9UK33 172 aa13.46□□□□□ -0.26
CDK11A-209ENST00000460465 TGOLN2O43493 480 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 PF4V1P10720 104 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF343Q6P1L6 599 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 SMCO4Q9NRQ5 59 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 TMEM14CQ9P0S9 112 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 ITPR2Q14571 2701 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 IGLV1-40P01703 118 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 NBEAP1P0C6P0 100 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 ADIRFQ15847 76 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 KLK15Q9H2R5 256 aa13.45□□□□□ -0.26
CDK11A-209ENST00000460465 CRYBB3P26998 211 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
CDK11A-209ENST00000460465 RPL23P62829 140 aaKnown RBP13.44□□□□□ -0.26
CDK11A-209ENST00000460465 ANKRD39Q53RE8 183 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 ELOVL1Q9BW60 279 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF98A6NK75 572 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 B4DEV8 164 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 S100A6P06703 90 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 S100A7AQ86SG5 101 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 DUX5Q96PT3 197 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 YAE1D1Q9NRH1 226 aa13.44□□□□□ -0.26
CDK11A-209ENST00000460465 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 H3BTX0 84 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
CDK11A-209ENST00000460465 TOMM20LQ6UXN7 152 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 LCNL1Q6ZST4 164 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF329Q86UD4 541 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 USMG5Q96IX5 58 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 PRSS22Q9GZN4 317 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 ZFAND3Q9H8U3 227 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 CCDC168Q8NDH2 2452 aa13.43□□□□□ -0.26
CDK11A-209ENST00000460465 A0A087WWC5 75 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 BPIFA4PQ86YQ2 179 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 NPFFR1Q9GZQ6 430 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF702PQ9H963 129 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 ZNF586Q9NXT0 402 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 FLNAP21333 2647 aaKnown RBP13.42□□□□□ -0.26
CDK11A-209ENST00000460465 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
CDK11A-209ENST00000460465 BMPR1BO00238 502 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms