RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 CRYBB3P26998 211 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 TAS2R45P59539 299 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 PRR20EP86478 221 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 PRR20CP86479 221 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 PRR20DP86480 221 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 PRR20BP86481 221 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 PRR20AP86496 221 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 AKR1C8PQ5T2L2 129 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 OR2G3Q8NGZ4 309 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 STOML3Q8TAV4 291 aa9.44□□□□□ -0.9
HDAC4-206ENST00000460235 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 SEC14L6B5MCN3 397 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 M6PRP20645 277 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 CBLN1P23435 193 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 ATP6V0CP27449 155 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 MEOX2P50222 304 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 RAB5CP51148 216 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 RHOBP62745 196 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 CD300CQ08708 224 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 STXBP6Q8NFX7 210 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 PHYHIPLQ96FC7 376 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 MRPL32Q9BYC8 188 aaKnown RBP9.43□□□□□ -0.9
HDAC4-206ENST00000460235 ARV1Q9H2C2 271 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 SMPXQ9UHP9 88 aa9.43□□□□□ -0.9
HDAC4-206ENST00000460235 TRAV25A0A0B4J276 109 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 SAP30O75446 220 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 C8orf88P0DMB2 117 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 FOLR2P14207 255 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 RPL7P18124 248 aaKnown RBP9.42□□□□□ -0.9
HDAC4-206ENST00000460235 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 UNQ9165/PRO28630Q6UXU0 137 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 RSG1Q9BU20 258 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 RHPN1-AS1Q9BWJ2 59 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 SLC25A32Q9H2D1 315 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 CYTL1Q9NRR1 136 aa9.42□□□□□ -0.9
HDAC4-206ENST00000460235 TMEM213A2RRL7 107 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 SPP1P10451 314 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 GATA2P23769 480 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-206ENST00000460235 GALR1P47211 349 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-206ENST00000460235 LCN12Q6JVE5 192 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
HDAC4-206ENST00000460235 LINC00305Q7Z4B0 112 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
HDAC4-206ENST00000460235 ACTR3CQ9C0K3 210 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-206ENST00000460235 CSN3P07498 182 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 CMC4P56277 68 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-206ENST00000460235 RAB2AP61019 212 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 FAM78BQ5VT40 261 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 OR10G4Q8NGN3 311 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 OR10G9Q8NGN4 311 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 OR10G7Q8NGN6 311 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 ST8SIA2Q92186 375 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 SLC25A39Q9BZJ4 359 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-206ENST00000460235 VSIRQ9H7M9 311 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 DOK5Q9P104 306 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 CUBNO60494 3623 aa9.4□□□□□ -0.9
HDAC4-206ENST00000460235 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 CHEK1O14757 476 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 ZNF207O43670 478 aaKnown RBP9.39□□□□□ -0.91
HDAC4-206ENST00000460235 BUB3O43684 328 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 NKX2-5P52952 324 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-206ENST00000460235 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
HDAC4-206ENST00000460235 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-206ENST00000460235 LRRC20Q8TCA0 184 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 FUT9Q9Y231 359 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 U3KQE9 123 aa9.39□□□□□ -0.91
HDAC4-206ENST00000460235 H3BRN7 92 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 ATF4P18848 351 aaPredicted RBP9.38□□□□□ -0.91
HDAC4-206ENST00000460235 GUK1Q16774 197 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
HDAC4-206ENST00000460235 FBN1P35555 2871 aaKnown RBP9.38□□□□□ -0.91
HDAC4-206ENST00000460235 TRAV2A0A0B4J234 112 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 ZNF785A8K8V0 405 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 BOLA2-SMG1P6H3BVE0 249 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-206ENST00000460235 IFNA7P01567 189 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 ID1P41134 155 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms