RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GAGE4Q13068 117 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 CMTM2Q8TAZ6 248 aa8.36□□□□□ -1.07
HERC4-207ENST00000460168 MRPL20Q9BYC9 149 aaKnown RBP8.36□□□□□ -1.07
HERC4-207ENST00000460168 SYNGR2O43760 224 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 APOA2P02652 100 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 HSPB1P04792 205 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 PFN1P07737 140 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 P0C879 139 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 TCTAP57738 103 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 FOXL1Q12952 345 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 CLDND2Q8NHS1 167 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 TMEM126AQ9H061 195 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 PARLQ9H300 379 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 CENPEQ02224 2701 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 CENPVL3A0A0U1RRI6 287 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 FAM90A26D6RGX4 464 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 J3QKU1 62 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 M0R1W7 72 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 ENSAO43768 121 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 GPR137BO60478 399 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 IGKV1-16P04430 117 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 MDKP21741 143 aaPredicted RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 COL8A1P27658 744 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 DIAPH2-AS1Q14236 149 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 C8orf86Q6ZUL3 223 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 RAB40CQ96S21 281 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
HERC4-207ENST00000460168 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 CELSR2Q9HCU4 2923 aa8.35□□□□□ -1.07
HERC4-207ENST00000460168 USP9YO00507 2555 aaPredicted RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 A0A0G2JLM5 398 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 FAM24AA6NFZ4 105 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 H3BP45 60 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 HMGB3O15347 200 aaKnown RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 HRASP01112 189 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 IGLV1-47P01700 117 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 PLA2G2AP14555 144 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 USF1P22415 310 aaPredicted RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 ZFP36P26651 326 aaKnown RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 ZNF137PP52743 207 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 C12orf54Q6X4T0 127 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 Q8N7P7 452 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 OR4A16Q8NH70 328 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 ST6GALNAC6Q969X2 333 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 RBMXL1Q96E39 390 aaKnown RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 OR9G9P0C7N8 305 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 IAPPP10997 89 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 TIGITQ495A1 244 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 ZNF787Q6DD87 383 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 TTC9CQ8N5M4 171 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 TMEM37Q8WXS4 190 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
HERC4-207ENST00000460168 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
HERC4-207ENST00000460168 TENM4Q6N022 2769 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 DIRC3C9JPN6 131 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 H0YJW9 148 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 BUB1B-PAK6H3BSN5 160 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 JTBO76095 146 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 SEC11BP0C7V7 166 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 LMO4P61968 165 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 EWSR1Q01844 656 aaKnown RBP eCLIP8.33□□□□□ -1.08
HERC4-207ENST00000460168 RPL7L1Q6DKI1 246 aaKnown RBP8.33□□□□□ -1.08
HERC4-207ENST00000460168 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 OR5AN1Q8NGI8 311 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 NABP2Q9BQ15 211 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 HSPB9Q9BQS6 159 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 FNDC4Q9H6D8 234 aaPredicted RBP8.33□□□□□ -1.08
HERC4-207ENST00000460168 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 FAM90A9PA6NNJ1 464 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 CST7O76096 145 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 NUDT3O95989 172 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 ORM1P02763 201 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 TMEM256Q8N2U0 113 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 OR4C13Q8NGP0 309 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 LHX4Q969G2 390 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 RPEQ96AT9 228 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
HERC4-207ENST00000460168 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 FBN2P35556 2912 aa8.33□□□□□ -1.08
HERC4-207ENST00000460168 MED13LQ71F56 2210 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 NUPR1O60356 82 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 ADIRFQ15847 76 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 VMO1Q7Z5L0 202 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 PDPNQ86YL7 162 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 KIR3DL3Q8N743 410 aa8.32□□□□□ -1.08
HERC4-207ENST00000460168 OSR1Q8TAX0 266 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms