RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CAMLGP49069 296 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 H2BFSP57053 126 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 OR2F1Q13607 317 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 USF2Q15853 346 aaPredicted RBP8.03□□□□□ -1.12
UBR4-208ENST00000459947 SPATA31B1PQ5VZV4 182 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 Q8N1Y9 231 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 BUB3O43684 328 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 RPL29P47914 159 aaKnown RBP8.03□□□□□ -1.12
UBR4-208ENST00000459947 APOC4P55056 127 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 SNRPD3P62318 126 aaKnown RBP8.03□□□□□ -1.12
UBR4-208ENST00000459947 OPCMLQ14982 345 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 FCN2Q15485 313 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 CST7O76096 145 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 RPL11P62913 178 aaKnown RBP8.03□□□□□ -1.12
UBR4-208ENST00000459947 SCGB1C1Q8TD33 95 aa8.03□□□□□ -1.12
UBR4-208ENST00000459947 CXCL2P19875 107 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 LRRC37A5PQ49AS3 106 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 ATP5SQ99766 215 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 KIR2DL5BA0A0G2JN68 375 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 KIR2DL5BA0A0G2JPC4 375 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 IZUMO1RA6ND01 250 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 AGPAT2O15120 278 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 COX7A2P2O60397 106 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 RPL12P30050 165 aaKnown RBP8.02□□□□□ -1.13
UBR4-208ENST00000459947 ZNF90Q03938 601 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 OR8I2Q8N0Y5 310 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 KIR2DL5AQ8N109 375 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 KIR2DL5BQ8NHK3 375 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 SRD5A3Q9H8P0 318 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 NRN1Q9NPD7 142 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 MBD2Q9UBB5 411 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 H3BRN7 92 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
UBR4-208ENST00000459947 IGHV4-30-4P0DP06 118 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 FGF7P21781 194 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 ARPC5LQ9BPX5 153 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 SHANK2-AS3Q9BTD1 123 aa8.02□□□□□ -1.13
UBR4-208ENST00000459947 K7EQG2 157 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 CCNKO75909 580 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 PSMB3P49720 205 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 ZNF266Q14584 549 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 TMEM217Q8N7C4 229 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 STXBP6Q8NFX7 210 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 GATAD1Q8WUU5 269 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 MS4A6AQ9H2W1 248 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 OR5AC2Q9NZP5 309 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 LOC102724200A0A096LPH7 203 aaPredicted RBP8.01□□□□□ -1.13
UBR4-208ENST00000459947 UBE2L5PA0A1B0GUS4 154 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 ATF4P18848 351 aaPredicted RBP8.01□□□□□ -1.13
UBR4-208ENST00000459947 INO80EQ8NBZ0 244 aaPredicted RBP8.01□□□□□ -1.13
UBR4-208ENST00000459947 OR5C1Q8NGR4 320 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 IGKV1OR2-108A0A075B7D4 117 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 OR5G3P0C626 314 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 ARL16Q0P5N6 197 aa8.01□□□□□ -1.13
UBR4-208ENST00000459947 SORL1Q92673 2214 aa8□□□□□ -1.13
UBR4-208ENST00000459947 ZNF98A6NK75 572 aa8□□□□□ -1.13
UBR4-208ENST00000459947 ORM2P19652 201 aa8□□□□□ -1.13
UBR4-208ENST00000459947 RNF126Q9BV68 326 aa8□□□□□ -1.13
UBR4-208ENST00000459947 IGHV3-49A0A0A0MS15 119 aa8□□□□□ -1.13
UBR4-208ENST00000459947 H0YIZ8 118 aa8□□□□□ -1.13
UBR4-208ENST00000459947 FRMD6-AS1P0C7T7 363 aa8□□□□□ -1.13
UBR4-208ENST00000459947 C10orf113Q5VZT2 155 aa8□□□□□ -1.13
UBR4-208ENST00000459947 MORN3Q6PF18 240 aaPredicted RBP8□□□□□ -1.13
UBR4-208ENST00000459947 AQP10Q96PS8 301 aa8□□□□□ -1.13
UBR4-208ENST00000459947 MRPL32Q9BYC8 188 aaKnown RBP8□□□□□ -1.13
UBR4-208ENST00000459947 TIMM9Q9Y5J7 89 aa8□□□□□ -1.13
UBR4-208ENST00000459947 ISLRO14498 428 aa8□□□□□ -1.13
UBR4-208ENST00000459947 GUK1Q16774 197 aa8□□□□□ -1.13
UBR4-208ENST00000459947 MGST2Q99735 147 aa8□□□□□ -1.13
UBR4-208ENST00000459947 ARL6Q9H0F7 186 aa8□□□□□ -1.13
UBR4-208ENST00000459947 DNAJC4Q9NNZ3 241 aa8□□□□□ -1.13
UBR4-208ENST00000459947 SLC39A9Q9NUM3 307 aa8□□□□□ -1.13
UBR4-208ENST00000459947 A0A087X0K7 114 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 EDN2P20800 178 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 B2MP61769 119 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 OR11H7Q8NGC8 314 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 SLC25A39Q9BZJ4 359 aaPredicted RBP7.99□□□□□ -1.13
UBR4-208ENST00000459947 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 CD7P09564 240 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 PRR20EP86478 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 PRR20CP86479 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 PRR20DP86480 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 PRR20BP86481 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 PRR20AP86496 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 BPIFA4PQ86YQ2 179 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 SLC50A1Q9BRV3 221 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 ARV1Q9H2C2 271 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 MAP6D1Q9H9H5 199 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 NOTCH3Q9UM47 2321 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 WDR61Q9GZS3 305 aaKnown RBP7.99□□□□□ -1.13
UBR4-208ENST00000459947 PXMP4Q9Y6I8 212 aa7.99□□□□□ -1.13
UBR4-208ENST00000459947 IGHV3OR16-13A0A075B7E8 117 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 IGHV3-74A0A0B4J1X5 117 aa7.98□□□□□ -1.13
UBR4-208ENST00000459947 TAAR5O14804 337 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms