RNA–Protein interactions for RNA: ENST00000458657.6

C1orf228-218, Transcript of Uncharacterized protein C1orf228, human

APPRIS P2 TSL 5 BASIC

Gene C1orf228, Length 1,818 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-218	ENST00000458657	OR2C1	O95371	312 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	PMS2P11	Q13670	270 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	KIAA0141	Q14154	515 aa	Predicted RBP	11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	PQLC2	Q6ZP29	291 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	ZNF414	Q96IQ9	312 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	SERTAD4	Q9NUC0	356 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	MRPL27	Q9P0M9	148 aa	Known RBP	11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657	VAX2	Q9UIW0	290 aa		11.32	□□□□□ -0.6
C1orf228-218	ENST00000458657		F8W036	122 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	TRBV12-3	P01733	135 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	PYY	P10082	97 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	FOSL1	P15407	271 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	CEBPG	P53567	150 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	SLC35B1	P78383	322 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657		Q6ZSV7	163 aa		11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	ZNF418	Q8TF45	676 aa	Predicted RBP	11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.31	□□□□□ -0.6
C1orf228-218	ENST00000458657	CLDN34	H7C241	214 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	HSPB1	P04792	205 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	SRP19	P09132	144 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	ARL3	P36405	182 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	UBE2L3	P68036	154 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	MEF2B	Q02080	365 aa	Predicted RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	ZNF600	Q6ZNG1	722 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	SLC35B3	Q9H1N7	401 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	HIVEP1	P15822	2718 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657		A0A0G2JLM5	398 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	APOC3	P02656	99 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	RPLP1	P05386	114 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	SNRPC	P09234	159 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	ATP5G3	P48201	142 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	CST9LP1	Q5W188	147 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	TEX38	Q6PEX7	206 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	CYB561D1	Q8N8Q1	229 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	OR4X2	Q8NGF9	303 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	OR5B12	Q96R08	314 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	PAXX	Q9BUH6	204 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	SMDT1	Q9H4I9	107 aa		11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.3	□□□□□ -0.6
C1orf228-218	ENST00000458657	RNASE1	P07998	156 aa	Known RBP	11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	HILS1	P60008	231 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	CD81	P60033	236 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	TOMM20L	Q6UXN7	152 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	OR4F5	Q8NH21	305 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	OR4F4	Q96R69	305 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	ATP6V0B	Q99437	205 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	OR51M1	Q9H341	326 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	ZFAND3	Q9H8U3	227 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	TMEM167B	Q9NRX6	74 aa		11.29	□□□□□ -0.6
C1orf228-218	ENST00000458657	TMEM89	A2RUT3	159 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	C11orf94	C9JXX5	98 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657		H3BRN7	92 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	REL	Q04864	619 aa	Predicted RBP	11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	FOXE3	Q13461	319 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	ZNF343	Q6P1L6	599 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	SHANK2-AS3	Q9BTD1	123 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	SEC11C	Q9BY50	192 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	FAM74A7	A6NL05	159 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	CRYBA1	P05813	215 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	GP9	P14770	177 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	TAGLN2	P37802	199 aa	Known RBP	11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	FXYD5	Q96DB9	178 aa		11.28	□□□□□ -0.6
C1orf228-218	ENST00000458657	BMPR1B	O00238	502 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	ELANE	P08246	267 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	GUCA2B	Q16661	112 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	C10orf91	Q5T1B1	145 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	KLHDC1	Q8N7A1	406 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	RABAC1	Q9UI14	185 aa		11.27	□□□□□ -0.61
C1orf228-218	ENST00000458657	ZNF98	A6NK75	572 aa		11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657	SOHLH1	Q5JUK2	328 aa		11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657	STXBP6	Q8NFX7	210 aa		11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657	SUN5	Q8TC36	379 aa		11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657	BLNK	Q8WV28	456 aa		11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657	CARHSP1	Q9Y2V2	147 aa	Known RBP	11.26	□□□□□ -0.61
C1orf228-218	ENST00000458657		H3BTX0	84 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	ZNF207	O43670	478 aa	Known RBP	11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	MYOZ3	Q8TDC0	251 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	C20orf24	Q9BUV8	137 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	NF1	P21359	2839 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	CLPSL1	A2RUU4	121 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	CYSRT1	A8MQ03	144 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	FAM90A2P	Q658T7	463 aa		11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	PEF1	Q9UBV8	284 aa	Known RBP	11.25	□□□□□ -0.61
C1orf228-218	ENST00000458657	NSD1	Q96L73	2696 aa	Predicted RBP	11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	GGTLC3	B5MD39	225 aa		11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	RPL15	P61313	204 aa	Known RBP	11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	UNQ9165/PRO28630	Q6UXU0	137 aa		11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	S100A7A	Q86SG5	101 aa		11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	RNF152	Q8N8N0	203 aa		11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	TMEM14C	Q9P0S9	112 aa		11.24	□□□□□ -0.61
C1orf228-218	ENST00000458657	SCO1	O75880	301 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	FAM209B	Q5JX69	171 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	BPIFA4P	Q86YQ2	179 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	RPUSD4	Q96CM3	377 aa	Known RBP	11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	JMJD8	Q96S16	334 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	ARL2-SNX15	V9GYD0	113 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	IGHV3OR16-13	A0A075B7E8	117 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	IGHV3-49	A0A0A0MS15	119 aa		11.23	□□□□□ -0.61
C1orf228-218	ENST00000458657	IGHV3-74	A0A0B4J1X5	117 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms