RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SSX7Q7RTT5 188 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 CCDC28AQ8IWP9 274 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 SVBPQ8N300 66 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 OR1B1Q8NGR6 318 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 Q8WTZ3 238 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 USMG5Q96IX5 58 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 HIGD1AQ9Y241 93 aa6.99□□□□□ -1.29
VPS50-207ENST00000458530 A0A0G2JLM5 398 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 SH2D7A6NKC9 451 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 G3V318 75 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 HOXA3O43365 443 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 PDE6DO43924 150 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 NDUFB8O95169 186 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 TRGV3P03979 118 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 GCHFRP30047 84 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 LYZP61626 148 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 CCL20P78556 96 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 ZNF90Q03938 601 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 RELQ04864 619 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 ICAM4Q14773 271 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 TIGITQ495A1 244 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 ZNF502Q8TBZ5 544 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 NKX6-2Q9C056 277 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 DOK5Q9P104 306 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 CARHSP1Q9Y2V2 147 aaKnown RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 SOX21Q9Y651 276 aaPredicted RBP6.98□□□□□ -1.29
VPS50-207ENST00000458530 VWFP04275 2813 aa6.98□□□□□ -1.29
VPS50-207ENST00000458530 PSMB11A5LHX3 300 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 F6UZH7 168 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 TMEM250H0YL14 139 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 BMPR1BO00238 502 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 HMGB3O15347 200 aaKnown RBP6.97□□□□□ -1.29
VPS50-207ENST00000458530 SNAPINO95295 136 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 OR2C1O95371 312 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 IGKV1-17P01599 117 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 APOC3P02656 99 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 PSG1P11464 419 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 ORM2P19652 201 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 GATA2P23769 480 aaPredicted RBP6.97□□□□□ -1.29
VPS50-207ENST00000458530 RAB9AP51151 201 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 TPPP2P59282 170 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 RPL15P61313 204 aaKnown RBP6.97□□□□□ -1.29
VPS50-207ENST00000458530 UBE2L3P68036 154 aaKnown RBP6.97□□□□□ -1.29
VPS50-207ENST00000458530 SOHLH1Q5JUK2 328 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 C10orf91Q5T1B1 145 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 ZNF600Q6ZNG1 722 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 LINC00305Q7Z4B0 112 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 SIGLECL1Q8N7X8 197 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 OR5AU1Q8NGC0 362 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 RXFP4Q8TDU9 374 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 RNF125Q96EQ8 232 aa6.97□□□□□ -1.29
VPS50-207ENST00000458530 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
VPS50-207ENST00000458530 OR2T8A6NH00 312 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 IL4P05112 153 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 PF4V1P10720 104 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 BLCAPP62952 87 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 SRSF3P84103 164 aaKnown RBP6.96□□□□□ -1.3
VPS50-207ENST00000458530 DEFA5Q01523 94 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 FAM74A3Q4VXF1 159 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 CST9LP1Q5W188 147 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 MIR17HGQ75NE6 70 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 ZNF418Q8TF45 676 aaPredicted RBP6.96□□□□□ -1.3
VPS50-207ENST00000458530 TMEM37Q8WXS4 190 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 JMJD8Q96S16 334 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 RARRES2Q99969 163 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 TCEAL7Q9BRU2 100 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 PAXXQ9BUH6 204 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 SCRT1Q9BWW7 348 aa6.96□□□□□ -1.3
VPS50-207ENST00000458530 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 LINC01548A6NM66 108 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 CLDN34H7C241 214 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 EREGO14944 169 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 TGOLN2O43493 480 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 PAGE4O60829 102 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 IGHG4P01861 327 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 CRYBA1P05813 215 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 SRP19P09132 144 aaKnown RBP6.95□□□□□ -1.3
VPS50-207ENST00000458530 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
VPS50-207ENST00000458530 GPR183P32249 361 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 SPATA31B1PQ5VZV4 182 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 Q6ZS46 218 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 OR4F5Q8NH21 305 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 MS4A10Q96PG2 267 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 SLC25A2Q9BXI2 301 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 OR51M1Q9H341 326 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 GNB4Q9HAV0 340 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 TMEM14CQ9P0S9 112 aa6.95□□□□□ -1.3
VPS50-207ENST00000458530 RABAC1Q9UI14 185 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms