RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 LINC01356Q8N9X3 169 aa12.78□□□□□ -0.36
CAPN13-203ENST00000458085 STXBP6Q8NFX7 210 aa12.78□□□□□ -0.36
CAPN13-203ENST00000458085 CHRDL1Q9BU40 450 aa12.78□□□□□ -0.36
CAPN13-203ENST00000458085 CR1P17927 2039 aa12.78□□□□□ -0.36
CAPN13-203ENST00000458085 ZNF469Q96JG9 3925 aaPredicted RBP12.77□□□□□ -0.36
CAPN13-203ENST00000458085 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.36
CAPN13-203ENST00000458085 YPEL3P61236 119 aaPredicted RBP12.77□□□□□ -0.36
CAPN13-203ENST00000458085 HIST2H2BCQ6DN03 193 aa12.77□□□□□ -0.36
CAPN13-203ENST00000458085 CTSGP08311 255 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 RHOGP84095 191 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 C1QL4Q86Z23 238 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
CAPN13-203ENST00000458085 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 H3BRN7 92 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 IGLV2-8P01709 118 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 FABP1P07148 127 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 ADMP35318 185 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 GNG4P50150 75 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
CAPN13-203ENST00000458085 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 SMUG1Q53HV7 270 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 ZNF414Q96IQ9 312 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 IGF2BP2-AS1Q96M15 143 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 OR5B12Q96R08 314 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 IGHV3-35A0A0C4DH35 117 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 PGPA6NDG6 321 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 PEX7O00628 323 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 TGFAP01135 160 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 TRGC2P03986 189 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 CD99P14209 185 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 C9orf152Q5JTZ5 239 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 PYGO2Q9BRQ0 406 aa12.76□□□□□ -0.37
CAPN13-203ENST00000458085 A0A1W2PPQ1 181 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 A6NDX4 124 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 FCGR2BP31994 310 aaPredicted RBP12.75□□□□□ -0.37
CAPN13-203ENST00000458085 KLK9Q2XQG4 91 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 KLK9Q9UKQ9 250 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 LY96Q9Y6Y9 160 aa12.75□□□□□ -0.37
CAPN13-203ENST00000458085 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
CAPN13-203ENST00000458085 GATA3P23771 443 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 SNRPEP62304 92 aaKnown RBP12.74□□□□□ -0.37
CAPN13-203ENST00000458085 C19orf54Q5BKX5 351 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 ZNF502Q8TBZ5 544 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 SGK494Q96LW2 274 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 SLC17A3O00476 420 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
CAPN13-203ENST00000458085 GPR183P32249 361 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 Q5PR19 223 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 Q6ZS46 218 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 OR10G8Q8NGN5 311 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 VN1R17PQ8TDU5 208 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 Q9H3A6 140 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 RPH3ALQ9UNE2 315 aa12.74□□□□□ -0.37
CAPN13-203ENST00000458085 ISLRO14498 428 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 S100PP25815 95 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 CCDC140Q96MF4 163 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 TRAV41A0A0B4J266 112 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 ZNF98A6NK75 572 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 MRPS12O15235 138 aaKnown RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 HIST1H1EP10412 219 aaKnown RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 SRP14P37108 136 aaKnown RBP12.73□□□□□ -0.37
CAPN13-203ENST00000458085 BLCAPP62952 87 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
CAPN13-203ENST00000458085 PPP1R2P9O14990 202 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 CLEC3BP05452 202 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 IGHV4-31P0DP07 118 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 PRB4P10163 310 aaPredicted RBP12.72□□□□□ -0.37
CAPN13-203ENST00000458085 EXOC3-AS1Q8N2X6 119 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 RNASE7Q9H1E1 156 aaKnown RBP12.72□□□□□ -0.37
CAPN13-203ENST00000458085 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 C5orf52A6NGY3 159 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 PHOX2AO14813 284 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 PLA2G2AP14555 144 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 CNN1P51911 297 aaKnown RBP12.72□□□□□ -0.37
CAPN13-203ENST00000458085 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 KRTAP1-3Q8IUG1 177 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 NOL4LQ96MY1 436 aaPredicted RBP12.72□□□□□ -0.37
CAPN13-203ENST00000458085 TXN2Q99757 166 aa12.72□□□□□ -0.37
CAPN13-203ENST00000458085 PRRC2AP48634 2157 aaKnown RBP12.71□□□□□ -0.37
CAPN13-203ENST00000458085 GCGP01275 180 aa12.71□□□□□ -0.37
CAPN13-203ENST00000458085 ERVFC1-1P60608 527 aa12.71□□□□□ -0.37
CAPN13-203ENST00000458085 CLEC19AQ6UXS0 136 aa12.71□□□□□ -0.37
CAPN13-203ENST00000458085 BPIFA4PQ86YQ2 179 aa12.71□□□□□ -0.37
CAPN13-203ENST00000458085 MGST1P10620 155 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms