RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TMEM147Q9BVK8 224 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 EDA2RQ9HAV5 297 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 NRN1Q9NPD7 142 aa13.36□□□□□ -0.27
PDLIM2-215ENST00000456545 PMS2P5A8MQ11 134 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 CCNKO75909 580 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 GATA2P23769 480 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 C1orf194Q5T5A4 169 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 CYP2G1PQ6ZSU1 146 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 OR1B1Q8NGR6 318 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
PDLIM2-215ENST00000456545 ID1P41134 155 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 PSMG4Q5JS54 123 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 TEPPQ6URK8 271 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 SLC25A22Q9H936 323 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 TP53TG1Q9Y2A0 90 aa13.34□□□□□ -0.27
PDLIM2-215ENST00000456545 HUWE1Q7Z6Z7 4374 aaKnown RBP13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 GOSR2O14653 212 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 RAP2BP61225 183 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 SELENOTP62341 195 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 ZFAND6Q6FIF0 208 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 S100A7AQ86SG5 101 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 GGACTQ9BVM4 153 aa13.33□□□□□ -0.28
PDLIM2-215ENST00000456545 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 KNCNA6PVL3 124 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 DEDDO75618 318 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 CA1P00915 261 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 RLN2P04090 185 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 OR5G3P0C626 314 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 GALR1P47211 349 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 RAB32Q13637 225 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 ACTL10Q5JWF8 245 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 TMEM182Q6ZP80 229 aaPredicted RBP13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 RNF183Q96D59 192 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 LINC00052Q96N35 136 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 DOK5Q9P104 306 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
PDLIM2-215ENST00000456545 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 HYPMO75409 117 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 CST7O76096 145 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 LINC00869P0C866 280 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 SLC38A11Q08AI6 406 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 RAB31Q13636 194 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 CASC10Q5T4H9 136 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 MARVELD1Q9BSK0 173 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 HIGD1AQ9Y241 93 aa13.31□□□□□ -0.28
PDLIM2-215ENST00000456545 SSNA1O43805 119 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 SIX6O95475 246 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 CYCSP99999 105 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 STX12Q86Y82 276 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 NBEAL2Q6ZNJ1 2754 aa13.3□□□□□ -0.28
PDLIM2-215ENST00000456545 HBG1P69891 147 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 HBG2P69892 147 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 MORN3Q6PF18 240 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 GATAD1Q8WUU5 269 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 GPR82Q96P67 336 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 RARRES2Q99969 163 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 RSG1Q9BU20 258 aa13.29□□□□□ -0.28
PDLIM2-215ENST00000456545 AGPAT2O15120 278 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 SPP1P10451 314 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 S100A11P31949 105 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 MEOX2P50222 304 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 SULT1A1P50225 295 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 SAMD13Q5VXD3 122 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 TRPT1Q86TN4 253 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 ZNF546Q86UE3 836 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 SLC25A32Q9H2D1 315 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 LYRM2Q9NU23 88 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
PDLIM2-215ENST00000456545 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 PSMB3P49720 205 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 FGL1Q08830 312 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 IL15RAQ13261 267 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 LRRC37A5PQ49AS3 106 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 NMES1Q9C002 83 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 UQCC1Q9NVA1 299 aa13.27□□□□□ -0.29
PDLIM2-215ENST00000456545 ATF4P18848 351 aaPredicted RBP13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 PLP1P60201 277 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 TMEM41BQ5BJD5 291 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 PXDC1Q5TGL8 231 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 OR11H2Q8NH07 326 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 SHANK2-AS3Q9BTD1 123 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 SLC25A31Q9H0C2 315 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 C11orf1Q9H5F2 150 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 TENM3Q9P273 2699 aa13.26□□□□□ -0.29
PDLIM2-215ENST00000456545 IGSF23A1L1A6 192 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 E5RGE8 158 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 H3BRN7 92 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 ISLRO14498 428 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms