RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 H3BMM0 161 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 DEFB4AO15263 64 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 GATA2P23769 480 aaPredicted RBP15.44■□□□□ 0.06
HMGB3-205ENST00000455596 S100A7P31151 101 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 PSMB3P49720 205 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 PAX9P55771 341 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 LINC00299Q6ZSB3 139 aa15.44■□□□□ 0.06
HMGB3-205ENST00000455596 PHLDA1Q8WV24 401 aaPredicted RBP15.44■□□□□ 0.06
HMGB3-205ENST00000455596 TRAV6A0A075B6T7 132 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 HLA-DRB4P13762 266 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 MIFP14174 115 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 ORM2P19652 201 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 TAS2R30P59541 319 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 TMEM14EPQ6UXP3 125 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 TMEM182Q6ZP80 229 aaPredicted RBP15.43■□□□□ 0.06
HMGB3-205ENST00000455596 Q8NAQ8 132 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 LINC00052Q96N35 136 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 TMEM147Q9BVK8 224 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 C1QTNF4Q9BXJ3 329 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 SLC25A22Q9H936 323 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 CLEC5AQ9NY25 188 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 HLA-DRB4X5D2U9 266 aa15.43■□□□□ 0.06
HMGB3-205ENST00000455596 ZNF98A6NK75 572 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 ZNF705EA8MWA4 302 aaPredicted RBP15.42■□□□□ 0.06
HMGB3-205ENST00000455596 SOCS3O14543 225 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 TSC22D2O75157 780 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 CCNKO75909 580 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 METTL15P1P0C7V9 234 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 GALR1P47211 349 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 NANOS2P60321 138 aaKnown RBP15.42■□□□□ 0.06
HMGB3-205ENST00000455596 DLK1P80370 383 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 SAMD13Q5VXD3 122 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 CYP2G1PQ6ZSU1 146 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 CSNK1G2-AS1Q8NCQ2 148 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 OR10P1Q8NGE3 313 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 OR1B1Q8NGR6 318 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 NUDT15Q9NV35 164 aa15.42■□□□□ 0.06
HMGB3-205ENST00000455596 RCL1Q9Y2P8 373 aaKnown RBP15.42■□□□□ 0.06
HMGB3-205ENST00000455596 CCSO14618 274 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 IL5P05113 134 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 MEOX2P50222 304 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 RRAS2P62070 204 aaPredicted RBP15.41■□□□□ 0.06
HMGB3-205ENST00000455596 ZNF846Q147U1 533 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 ZNF431Q8TF32 576 aaPredicted RBP15.41■□□□□ 0.06
HMGB3-205ENST00000455596 S100ZQ8WXG8 99 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 LINC00476Q8WZB0 136 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 SLC25A32Q9H2D1 315 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 SAV1Q9H4B6 383 aaPredicted RBP15.41■□□□□ 0.06
HMGB3-205ENST00000455596 TBC1D24Q9ULP9 559 aa15.41■□□□□ 0.06
HMGB3-205ENST00000455596 IGHV4-28A0A0C4DH34 117 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 FNDC10F2Z333 226 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 ISLRO14498 428 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 MBPP02686 304 aaPredicted RBP15.4■□□□□ 0.06
HMGB3-205ENST00000455596 GDF5OSQ5U4N7 250 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 FOXI2Q6ZQN5 318 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 GPR82Q96P67 336 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 SEC22CQ9BRL7 303 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 NPVFQ9HCQ7 196 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 XCL2Q9UBD3 114 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 MGAT4CQ9UBM8 478 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 X6R8D5 127 aa15.4■□□□□ 0.06
HMGB3-205ENST00000455596 LY6G6CO95867 125 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 H2AFB2P0C5Z0 115 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 RBMY1A1P0DJD3 496 aaKnown RBP15.39■□□□□ 0.05
HMGB3-205ENST00000455596 RBMY1CP0DJD4 496 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 SELENOTP62341 195 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 RBMY1FQ15415 496 aaKnown RBP15.39■□□□□ 0.05
HMGB3-205ENST00000455596 C16orf92Q96LL3 132 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 DOK5Q9P104 306 aa15.39■□□□□ 0.05
HMGB3-205ENST00000455596 FAM240BA0A1B0GVZ2 78 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 FAM25EA8MYX2 175 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 L7N2F9 121 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 DEFB1P60022 68 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 RAP2BP61225 183 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 VAMP2P63027 116 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 MZT2BQ6NZ67 158 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 GSG1LQ6UXU4 331 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 C12orf45Q8N5I9 185 aaPredicted RBP15.38■□□□□ 0.05
HMGB3-205ENST00000455596 RSG1Q9BU20 258 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 HRH4Q9H3N8 390 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 RYR2Q92736 4967 aa15.38■□□□□ 0.05
HMGB3-205ENST00000455596 C7orf66A4D0T2 115 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 C5orf51A6NDU8 294 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 H3BRN7 92 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 IGKV3-20P01619 116 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 LINC00869P0C866 280 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 PLP1P60201 277 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 SPATA31B1PQ5VZV4 182 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 TEPPQ6URK8 271 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 CLUHP3Q96NS8 147 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 SCRT1Q9BWW7 348 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 SLC25A39Q9BZJ4 359 aaPredicted RBP15.37■□□□□ 0.05
HMGB3-205ENST00000455596 RPRMQ9NS64 109 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 HIGD1AQ9Y241 93 aa15.37■□□□□ 0.05
HMGB3-205ENST00000455596 LSM5Q9Y4Y9 91 aaKnown RBP15.37■□□□□ 0.05
HMGB3-205ENST00000455596 HYPMO75409 117 aa15.36■□□□□ 0.05
HMGB3-205ENST00000455596 OR5G3P0C626 314 aa15.36■□□□□ 0.05
HMGB3-205ENST00000455596 EBLN2Q6P2I7 272 aa15.36■□□□□ 0.05
HMGB3-205ENST00000455596 OR4B1Q8NGF8 309 aa15.36■□□□□ 0.05
HMGB3-205ENST00000455596 SHANK2-AS3Q9BTD1 123 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms