RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 KLF12Q9Y4X4 402 aa5.34□□□□□ -1.55
ECHDC1-210ENST00000454859 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 F8W735 103 aaPredicted RBP5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 ELANEP08246 267 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 OR10J4P0C629 311 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 NBEAP1P0C6P0 100 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 GP9P14770 177 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 BTN1A1Q13410 526 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 DEFB112Q30KQ8 113 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 OR5T1Q8NG75 326 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF503Q96F45 646 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 TMPRSS5Q9H3S3 457 aa5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 PUS1Q9Y606 427 aaKnown RBP eCLIP5.34□□□□□ -1.56
ECHDC1-210ENST00000454859 A0A087X0K7 114 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 A0A1B0GV50 99 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 NDUFA4O00483 81 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 OR2J3O76001 311 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 ORM2P19652 201 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 COL8A1P27658 744 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 SRP14P37108 136 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 FOXE3Q13461 319 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 FAM103A1Q9BTL3 118 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 RPS10P5Q9NQ39 176 aa5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 YTHDF2Q9Y5A9 579 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 SETXQ7Z333 2677 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-210ENST00000454859 HELTA6NFD8 242 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 K7EMT4 169 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 K7EQM0 130 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 FOSL1P15407 271 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 S100PP25815 95 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 CNN1P51911 297 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 LYZP61626 148 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 ECSCRQ19T08 205 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 COX19Q49B96 90 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 SPATA31B1PQ5VZV4 182 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 C1QL4Q86Z23 238 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 C2CD4CQ8TF44 421 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 MRPL53Q96EL3 112 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 FMC1Q96HJ9 113 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 SPG11Q96JI7 2443 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 A0A1W2PS18 150 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF98A6NK75 572 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 IL4P05112 153 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 IGLC2P0DOY2 106 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 GATA2P23769 480 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 RPL23P62829 140 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 FBLN7Q53RD9 439 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 ATRAIDQ6UW56 229 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 GRAMD2BQ96HH9 432 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 ATG101Q9BSB4 218 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 U3KQE9 123 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 DCHS2Q6V1P9 2916 aa5.32□□□□□ -1.56
ECHDC1-210ENST00000454859 TRBV19A0A075B6N1 114 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TRBV24-1A0A075B6N3 115 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 NDUFB4O95168 129 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TRGV3P03979 118 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 CRYBB3P26998 211 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 ATP5G3P48201 142 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 FOXL1Q12952 345 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TMEM183BQ1AE95 376 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TEX38Q6PEX7 206 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 KCNIP4Q6PIL6 250 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 FAM231DQ6ZW35 169 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 LINC01551Q86U37 167 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 ZNF329Q86UD4 541 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TMEM219Q86XT9 240 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 MYOZ3Q8TDC0 251 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 OR5B12Q96R08 314 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 JMJD8Q96S16 334 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 METTL26Q96S19 204 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 SLC50A1Q9BRV3 221 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 OSTCQ9NRP0 149 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 EPDR1Q9UM22 224 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 TENM4Q6N022 2769 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 PEX7O00628 323 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 MRPS12O15235 138 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 GGCTO75223 188 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 APELAP0DMC3 54 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 PSMB8P28062 276 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 AKR1C3P42330 323 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 GALR1P47211 349 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 GNG4P50150 75 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 ISOC2Q96AB3 205 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 YPEL4Q96NS1 127 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 ZFAND3Q9H8U3 227 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 PTPN13Q12923 2485 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 NAV2Q8IVL1 2488 aa5.31□□□□□ -1.56
ECHDC1-210ENST00000454859 DOPEY2Q9Y3R5 2298 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 MED13LQ71F56 2210 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 HECTD1Q9ULT8 2610 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 IGHV3OR16-10A0A075B7F0 116 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 RBAKDNA6NC62 111 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 COLCA2A8K830 154 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 GGTLC3B5MD39 225 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 H7BYZ3 331 aa5.3□□□□□ -1.56
ECHDC1-210ENST00000454859 ISLRO14498 428 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms