RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NBDYA0A0U1RRE5 68 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM189A5PLL7 270 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZFP92A6NM28 416 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 F5H768 121 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 APOA1P02647 267 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 IAPPP10997 89 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 PSMB3P49720 205 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 YPEL3P61236 119 aaPredicted RBP4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HAMPP81172 84 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 PSG9Q00887 426 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OXA1LQ15070 435 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NDUFA5Q16718 116 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RRN3P1Q2M238 152 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C2orf83Q53S99 150 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NMSQ5H8A3 153 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AMTNQ6UX39 209 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SELENOHQ8IZQ5 122 aaKnown RBP4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C6orf223Q8N319 242 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CCDC71LQ8N9Z2 235 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RNF141Q8WVD5 230 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RBPMSQ93062 196 aaKnown RBP4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ABHD1Q96SE0 405 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NEU1Q99519 415 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC25A39Q9BZJ4 359 aaPredicted RBP4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM222Q9H0R3 208 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 MAGT1Q9H0U3 335 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NAA60Q9H7X0 242 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 DOK5Q9P104 306 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 EXTL2Q9UBQ6 330 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 LINC00588Q9Y4M8 146 aa4.2□□□□□ -1.74
HLA-DPA3-207ENST00000454398 IGKV1OR2-108A0A075B7D4 117 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TRAV30A0A087WSZ9 112 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 PLAC8L1A1L4L8 177 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GSTZ1O43708 216 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RAB3DO95716 219 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 INSP01308 110 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SNRPCP09234 159 aaKnown RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC25A4P12235 298 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HTN1P15515 57 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AZU1P20160 251 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GATA2P23769 480 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CNN1P51911 297 aaKnown RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 NKX2-5P52952 324 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AP2S1P53680 142 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RNF212Q495C1 297 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 AARDQ4LEZ3 155 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 Q8N1X5 172 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR11H7Q8NGC8 314 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR4C16Q8NGL9 310 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RNASEH2CQ8TDP1 164 aaKnown RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GLYATL2Q8WU03 294 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ZNF486Q96H40 463 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C16orf92Q96LL3 132 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RTBDNQ9BSG5 229 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FUNDC2Q9BWH2 189 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 PARD6GQ9BYG4 376 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RBKSQ9H477 322 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 MTFP1Q9UDX5 166 aa4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 C14orf166Q9Y224 244 aaKnown RBP4.19□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TRAV8-2A0A0B4J237 113 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 A0A0J9YY99 117 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TEX48A0A1B0GUV7 120 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CRYM-AS1A6NIL9 109 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 H3BP45 60 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CRXO43186 299 aaPredicted RBP4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ATG12O94817 140 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CDS2O95674 445 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SULT1A3P0DMM9 295 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SULT1A4P0DMN0 295 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SUPT4H1P63272 117 aaKnown RBP4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FGL1Q08830 312 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 GAMTQ14353 236 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 STEAP1BQ6NZ63 245 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 EBLN2Q6P2I7 272 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SSX7Q7RTT5 188 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 LYZL2Q7Z4W2 148 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR8I2Q8N0Y5 310 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 LGI3Q8N145 548 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TERB2Q8NHR7 220 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 DTD1Q8TEA8 209 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SLC35E1Q96K37 410 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 FAM210BQ96KR6 192 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 IGF2BP2-AS1Q96M15 143 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 RSG1Q9BU20 258 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 MIXL1Q9H2W2 232 aa4.18□□□□□ -1.74
HLA-DPA3-207ENST00000454398 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ISLRO14498 428 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TBPP20226 339 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 VAMP1P23763 118 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 ID1P41134 155 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 PAX9P55771 341 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TAS2R19P59542 299 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 CLINT1Q14677 625 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 OR8G2PQ6IF36 304 aa4.17□□□□□ -1.74
HLA-DPA3-207ENST00000454398 TMEM182Q6ZP80 229 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms