RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 GAR1Q9NY12 217 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-204ENST00000453046 IGKV1D-37A0A075B6S9 117 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 TRAV30A0A087WSZ9 112 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 ZFP92A6NM28 416 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 UMAD1C9J7I0 102 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 OR10J1P30954 320 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 RPL29P47914 159 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 CD81P60033 236 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 SELENOTP62341 195 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 FAM106AQ4KMX7 169 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
SQSTM1-204ENST00000453046 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 ZNF320A2RRD8 509 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 F8W735 103 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 LGALS9O00182 355 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 FABP1P07148 127 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 FOLR2P14207 255 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 SULT1A2P50226 295 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 RAB5CP51148 216 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 ADAMTSL5Q6ZMM2 481 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 CYP2G1PQ6ZSU1 146 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 GPHB5Q86YW7 130 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 LRRC20Q8TCA0 184 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 SPATA25Q9BR10 227 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 PXMP4Q9Y6I8 212 aa13.59□□□□□ -0.23
SQSTM1-204ENST00000453046 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 GNG7O60262 68 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 MBP02144 154 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 CLEC3BP05452 202 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 B2MP61769 119 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 PRR20EP86478 221 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 PRR20CP86479 221 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 PRR20DP86480 221 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 PRR20BP86481 221 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 PRR20AP86496 221 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 HAGHQ16775 308 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 DEFB114Q30KQ6 69 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 Q56UQ5 140 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 AKR1C8PQ5T2L2 129 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 CASC10Q5T4H9 136 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 STPG3Q8N7X2 389 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 TECRQ9NZ01 308 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-204ENST00000453046 FFAR4Q5NUL3 377 aa13.57□□□□□ -0.24
SQSTM1-204ENST00000453046 FAM74A1Q5RGS3 127 aa13.57□□□□□ -0.24
SQSTM1-204ENST00000453046 DPPA3Q6W0C5 159 aa13.57□□□□□ -0.24
SQSTM1-204ENST00000453046 RNF141Q8WVD5 230 aa13.57□□□□□ -0.24
SQSTM1-204ENST00000453046 SLC39A9Q9NUM3 307 aa13.57□□□□□ -0.24
SQSTM1-204ENST00000453046 ZNF785A8K8V0 405 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 IGKV1-17P01599 117 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 EDN2P20800 178 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 CBLN1P23435 193 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 TMEM41BQ5BJD5 291 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
SQSTM1-204ENST00000453046 NUPL2O15504 423 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 TOMM40O96008 361 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 CD7P09564 240 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 GPR183P32249 361 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 YPEL3P61236 119 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 ACOT6Q3I5F7 207 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 SPSB3Q6PJ21 355 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 BPIFCQ8NFQ6 507 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
SQSTM1-204ENST00000453046 TGOLN2O43493 480 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 LINC00869P0C866 280 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 M6PRP20645 277 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 RAB14P61106 215 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 ZNF90Q03938 601 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 TIGITQ495A1 244 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 DEFB125Q8N687 156 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 SAT2Q96F10 170 aaPredicted RBP13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 SELENOKQ9Y6D0 94 aa13.54□□□□□ -0.24
SQSTM1-204ENST00000453046 TMEM213A2RRL7 107 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 OR2T8A6NH00 312 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 A8MWP6 167 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 OR11H12B2RN74 326 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 YIF1AO95070 293 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 RAB2AP61019 212 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 CLLU1Q5K131 121 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 Q6ZRG5 221 aa13.53□□□□□ -0.24
SQSTM1-204ENST00000453046 IGHV3-35A0A0C4DH35 117 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 ZNF705EA8MWA4 302 aaPredicted RBP13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 CTSGP08311 255 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 NMBP08949 121 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 ADMP35318 185 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 PLP1P60201 277 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 ZFAND6Q6FIF0 208 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 OR51G1Q8NGK1 321 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 FAM213BQ8TBF2 198 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 PFDN5Q99471 154 aa13.52□□□□□ -0.25
SQSTM1-204ENST00000453046 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms