RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SYNGR2O43760 224 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 SH2D1AO60880 128 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGKV1D-33P01593 117 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGKV1-33P01594 117 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 IGHV1-69P01742 117 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 HBDP02042 147 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 TRGC1P0CF51 173 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 CCL3P10147 92 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 UBA52P62987 128 aaKnown RBP3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF90Q03938 601 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 KISS1Q15726 138 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 CLLU1Q5K131 121 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 C10orf91Q5T1B1 145 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 ZNF322Q6U7Q0 402 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 C18orf65Q6ZTR6 163 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 LINC00471Q8N535 108 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 POM121L12Q8N7R1 296 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 CNEP1R1Q8N9A8 125 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 LINC01560Q8TB33 94 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 MCEEQ96PE7 176 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 SEC11CQ9BY50 192 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 PRO1933Q9H354 126 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 FKBP11Q9NYL4 201 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 NOP16Q9Y3C1 178 aaKnown RBP3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 TMEM14AQ9Y6G1 99 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 HSPE1-MOB4S4R3N1 261 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 CUL7Q14999 1698 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 ATG2AQ2TAZ0 1938 aa3.03□□□□□ -1.92
HMGB3P21-201ENST00000452483 PHIPQ8WWQ0 1821 aa3.03□□□□□ -1.93
HMGB3P21-201ENST00000452483 N4BP2Q86UW6 1770 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 MYH7BA7E2Y1 1941 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 GRIFINA4D1Z8 144 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 GEMIN2O14893 280 aaKnown RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 GIG44P09565 113 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF19P17023 458 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 Q56UQ5 140 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 C9orf153Q5TBE3 101 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 LINC01545Q5VT33 79 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 NOXRED1Q6NXP6 359 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 SOSTDC1Q6X4U4 206 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 FOXI2Q6ZQN5 318 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 SIGLECL1Q8N7X8 197 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF443Q9Y2A4 671 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 TRAPPC1Q9Y5R8 145 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 CHCHD2Q9Y6H1 151 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 BAZ1AQ9NRL2 1556 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 MAST2Q6P0Q8 1798 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 KIAA1551Q9HCM1 1747 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 RGS12O14924 1447 aa3.02□□□□□ -1.93
HMGB3P21-201ENST00000452483 MYH9P35579 1960 aaKnown RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 LRP4O75096 1905 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 AKAP11Q9UKA4 1901 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 MED1Q15648 1581 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 WNK3Q9BYP7 1800 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 TRBV24-1A0A075B6N3 115 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 IGHV3-64DA0A0J9YX35 117 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 H3BMM0 161 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 APOC4-APOC2K7ER74 178 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 LY6HO94772 140 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 APOC2P02655 101 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 PMP2P02689 132 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 GZMBP10144 247 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 TPT1P13693 172 aaKnown RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZNF846Q147U1 533 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 PYY3Q5JQD4 70 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 C16orf47Q6ZP98 133 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 UBE2WQ96B02 151 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 AGPAT4-IT1Q9H0P7 198 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 SAR1AQ9NR31 198 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 DNAJC15Q9Y5T4 150 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 MAPKBP1O60336 1514 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 DLC1Q96QB1 1528 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 CITO14578 2027 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 DSCAMO60469 2012 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 PCNX3Q9H6A9 2034 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 TP53BP1Q12888 1972 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 BCORL1Q5H9F3 1711 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 ADGRL2O95490 1459 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 PIK3C2AO00443 1686 aa3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 TROQ12816 1431 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P21-201ENST00000452483 TRBV20-1A0A075B6N2 111 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 IGKV6D-41A0A0C4DH26 115 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 C17orf51A8MQB3 221 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 C3orf84H3BNL1 204 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 LECT2O14960 151 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 NPYP01303 97 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 RBP4P02753 201 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 CTSDP07339 412 aaPredicted RBP3□□□□□ -1.93
HMGB3P21-201ENST00000452483 FOXA1P55317 472 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 MIAQ16674 131 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 HIGD2BQ4VC39 106 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 KHDC3LQ587J8 217 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 Q6ZTC4 211 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 Q6ZUT4 128 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 SLC35E3Q7Z769 313 aa3□□□□□ -1.93
HMGB3P21-201ENST00000452483 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms