RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PHLDA1Q8WV24 401 aaPredicted RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 TRGV9Q99603 122 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 SEC22CQ9BRL7 303 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 WDR12Q9GZL7 423 aaKnown RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 NDUFA13Q9P0J0 144 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 PFDN2Q9UHV9 154 aa7.06□□□□□ -1.28
USP54-207ENST00000451492 RCL1Q9Y2P8 373 aaKnown RBP7.06□□□□□ -1.28
USP54-207ENST00000451492 IGHV4-28A0A0C4DH34 117 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
USP54-207ENST00000451492 MORN3Q6PF18 240 aaPredicted RBP7.05□□□□□ -1.28
USP54-207ENST00000451492 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
USP54-207ENST00000451492 BPIFCQ8NFQ6 507 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 C11orf45Q8TAV5 145 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 SLC25A32Q9H2D1 315 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 C11orf68Q9H3H3 251 aaKnown RBP7.05□□□□□ -1.28
USP54-207ENST00000451492 NUDT15Q9NV35 164 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 XCL2Q9UBD3 114 aa7.05□□□□□ -1.28
USP54-207ENST00000451492 LSM5Q9Y4Y9 91 aaKnown RBP7.05□□□□□ -1.28
USP54-207ENST00000451492 IGHV3OR16-12A0A075B7B8 117 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 F6UB75 175 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 TCRBP04435 133 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 ID3Q02535 119 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 FGL1Q08830 312 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 CYP2G1PQ6ZSU1 146 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 Q8NAQ8 132 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 MITD1Q8WV92 249 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 TMEM147Q9BVK8 224 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 MGAT4CQ9UBM8 478 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 TBC1D24Q9ULP9 559 aa7.04□□□□□ -1.28
USP54-207ENST00000451492 KLK5Q9Y337 293 aaPredicted RBP7.04□□□□□ -1.28
USP54-207ENST00000451492 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
USP54-207ENST00000451492 C5orf51A6NDU8 294 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 ZNF98A6NK75 572 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 H3BMM0 161 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 L7N2F9 121 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 IL5P05113 134 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 OR5G3P0C626 314 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 RBMY1A1P0DJD3 496 aaKnown RBP7.03□□□□□ -1.28
USP54-207ENST00000451492 RBMY1CP0DJD4 496 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 PRB4P10163 310 aaPredicted RBP7.03□□□□□ -1.28
USP54-207ENST00000451492 HLA-DRB4P13762 266 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 ID1P41134 155 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 GALR1P47211 349 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 BCAP31P51572 246 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 PAX9P55771 341 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 VAMP2P63027 116 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 SLC38A11Q08AI6 406 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 ZNF846Q147U1 533 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 RBMY1FQ15415 496 aaKnown RBP7.03□□□□□ -1.28
USP54-207ENST00000451492 IGFL4Q6B9Z1 124 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 ZNF767PQ75MW2 155 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 SMIM8Q96KF7 97 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 UHRF2Q96PU4 802 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 SCRT1Q9BWW7 348 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 X6R8D5 127 aa7.03□□□□□ -1.28
USP54-207ENST00000451492 FAM240BA0A1B0GVZ2 78 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 PMS2P5A8MQ11 134 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 SOCS3O14543 225 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 MBPP02686 304 aaPredicted RBP7.02□□□□□ -1.29
USP54-207ENST00000451492 H2AFB2P0C5Z0 115 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 LINC00869P0C866 280 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 MIFP14174 115 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 PSMB3P49720 205 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 S100A10P60903 97 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 RAP2BP61225 183 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 NUTF2P61970 127 aaKnown RBP7.02□□□□□ -1.29
USP54-207ENST00000451492 CNPY1Q3B7I2 92 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 TMEM41BQ5BJD5 291 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 C1orf194Q5T5A4 169 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 TMEM14EPQ6UXP3 125 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 TMEM144Q7Z5S9 345 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 OR10P1Q8NGE3 313 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 ZNF431Q8TF32 576 aaPredicted RBP7.02□□□□□ -1.29
USP54-207ENST00000451492 C20orf173Q96LM9 149 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 RSG1Q9BU20 258 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 CCDC32Q9BV29 185 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 MFFQ9GZY8 342 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 ARL6Q9H0F7 186 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 SLC35B3Q9H1N7 401 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 SAV1Q9H4B6 383 aaPredicted RBP7.02□□□□□ -1.29
USP54-207ENST00000451492 CELA1Q9UNI1 258 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 HIGD1AQ9Y241 93 aa7.02□□□□□ -1.29
USP54-207ENST00000451492 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 C7orf66A4D0T2 115 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 ZNF705EA8MWA4 302 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 H3BRN7 92 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 K7EPK0 472 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 CFDP00746 253 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 SNRPCP09234 159 aaKnown RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 ATF4P18848 351 aaPredicted RBP7.01□□□□□ -1.29
USP54-207ENST00000451492 CAV2P51636 162 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 DLK1P80370 383 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 ARL16Q0P5N6 197 aa7.01□□□□□ -1.29
USP54-207ENST00000451492 EBLN2Q6P2I7 272 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms