RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 FAM74A1Q5RGS3 127 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 FAM104BQ5XKR9 115 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 OR2T2Q6IF00 324 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 CGB2Q6NT52 195 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 C7orf65Q6ZTY9 151 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 MIR17HGQ75NE6 70 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 ZNF720Q7Z2F6 126 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 SPATA12Q7Z6I5 190 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 C20orf203Q8NBC4 194 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 GTSF1Q8WW33 167 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 LINC00052Q96N35 136 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 C16orf95Q9H693 158 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 SCRT2Q9NQ03 307 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 RPL26L1Q9UNX3 145 aaKnown RBP2.39□□□□□ -2.03
SSXP4-201ENST00000451349 PHLDA3Q9Y5J5 127 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 DNAJC15Q9Y5T4 150 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 PHIPQ8WWQ0 1821 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 RTEL1-TNFRSF6BF6WH68 1400 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 GLI3P10071 1580 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 SBF1O95248 1867 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 CFTRP13569 1480 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 CEP164Q9UPV0 1460 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 CCDC180Q9P1Z9 1646 aa2.39□□□□□ -2.03
SSXP4-201ENST00000451349 MYH7P12883 1935 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 MYH11P35749 1972 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 A0A087X002 238 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 FAM24AA6NFZ4 105 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 ZFP92A6NM28 416 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 MCRIP1C9JLW8 97 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 K7ERJ3 54 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 M0R129 80 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 M0R2P5 195 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 LINC01565O15544 149 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 IGLV3-25P01717 112 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV3-30-3P0DP02 117 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 TPT1P13693 172 aaKnown RBP2.38□□□□□ -2.03
SSXP4-201ENST00000451349 HLA-DMBP28068 263 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 MRPS36P82909 103 aaKnown RBP2.38□□□□□ -2.03
SSXP4-201ENST00000451349 EBI3Q14213 229 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 SCN5AQ14524 2016 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 PEA15Q15121 130 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 NOXRED1Q6NXP6 359 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 Q6ZUT4 128 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 SMIM29Q86T20 159 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 ZFAND2AQ8N6M9 145 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 OTOSQ8NHW6 89 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 ITLN2Q8WWU7 325 aaPredicted RBP2.38□□□□□ -2.03
SSXP4-201ENST00000451349 S100ZQ8WXG8 99 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 CDK5RAP2Q96SN8 1893 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 UACAQ9BZF9 1416 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 LINC00588Q9Y4M8 146 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 UBR2Q8IWV8 1755 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 FYCO1Q9BQS8 1478 aa2.38□□□□□ -2.03
SSXP4-201ENST00000451349 PIK3C2AO00443 1686 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 TRGV5A0A0B4J1U4 118 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 HYPMO75409 117 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 TCL1BO95988 128 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 INSP01308 110 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV3-7P01780 117 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 SLC25A4P12235 298 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 FABP4P15090 132 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 SLC25A16P16260 332 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 CRISP3P54108 245 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
SSXP4-201ENST00000451349 LINC00471Q8N535 108 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 C14orf178Q8N769 122 aaPredicted RBP2.37□□□□□ -2.03
SSXP4-201ENST00000451349 DIRC1Q969H9 104 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 C1orf147Q96MC9 270 aaPredicted RBP2.37□□□□□ -2.03
SSXP4-201ENST00000451349 PKMYT1Q99640 499 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 PLA2G12AQ9BZM1 189 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 GABARAPL1Q9H0R8 117 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 LSM2Q9Y333 95 aaKnown RBP2.37□□□□□ -2.03
SSXP4-201ENST00000451349 TPRKBQ9Y3C4 175 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 SMARCA4P51532 1647 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 ADGRL1O94910 1474 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 POLA1P09884 1462 aaPredicted RBP2.37□□□□□ -2.03
SSXP4-201ENST00000451349 FER1L6Q2WGJ9 1857 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 ABCC3O15438 1527 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 DLC1Q96QB1 1528 aa2.37□□□□□ -2.03
SSXP4-201ENST00000451349 MIA3Q5JRA6 1907 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 DICER1Q9UPY3 1922 aaKnown RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 IGHV1-3A0A0C4DH29 117 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 A0A1B0GVX0 72 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 C3orf84H3BNL1 204 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 H3BQ15 152 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 IGLV2-11P01706 119 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 HLA-DQA1P01909 254 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 IGKV1-16P04430 117 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 CD28P10747 220 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 CRIP2P52943 208 aaPredicted RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 PCBD1P61457 104 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 NPC2P61916 151 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 GFI1BQ5VTD9 330 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 ZNF322Q6U7Q0 402 aaPredicted RBP2.36□□□□□ -2.03
SSXP4-201ENST00000451349 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
SSXP4-201ENST00000451349 FAM216BQ8N7L0 139 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms