RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CCL8P80075 99 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 SRSF2Q01130 221 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 ZC2HC1BQ5TFG8 222 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 C1orf53Q5VUE5 145 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 ZNF441Q8N8Z8 693 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 NABP1Q96AH0 204 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 C18orf15Q96N68 181 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 BEX4Q9NWD9 120 aaPredicted RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 CELA2AP08217 269 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 CECR9P0C854 216 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 P0DMU3 169 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 FAM231AP0DMU4 169 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 FAM231CP0DMU5 169 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 ALKBH6Q3KRA9 238 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 EBLN2Q6P2I7 272 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 ZNF497Q6ZNH5 498 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 SPACA3Q8IXA5 215 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 GTSF1Q8WW33 167 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 RCHY1Q96PM5 261 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 NAA38Q9BRA0 125 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 PILRAQ9UKJ1 303 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 SERP1Q9Y6X1 66 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 VWC2LB2RUY7 222 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 IGKV1D-16P01601 117 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 COX6A1P12074 109 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 FAM104BQ5XKR9 115 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 DGAT2L7PQ6IED9 249 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 WFDC5Q8TCV5 224 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 C10orf105Q8TEF2 133 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 SARAFQ96BY9 339 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 VKORC1Q9BQB6 163 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 SRSF8Q9BRL6 282 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 UBL5Q9BZL1 73 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 PHLDA3Q9Y5J5 127 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 TPRP12270 2363 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 NUP210LQ5VU65 1888 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 A0A1W2PNR3 127 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 F8VRH5 84 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 MT-ATP8P03928 68 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 CFC1BP0CG36 223 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 CFC1P0CG37 223 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 COX7CP15954 63 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 CNTFRP26992 372 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 RPL27AP46776 148 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 FOXG1P55316 489 aaPredicted RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 TCF15Q12870 199 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 MBNL2Q5VZF2 373 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 LINC00526Q96FQ7 95 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 TMEM14CQ9P0S9 112 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 RFNGQ9Y644 331 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 KMT2EQ8IZD2 1858 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 KIAA1671Q9BY89 1806 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 EVPLQ92817 2033 aa1.81□□□□□ -2.12
USP53-202ENST00000450251 TNRC6AQ8NDV7 1962 aaKnown RBP1.81□□□□□ -2.12
USP53-202ENST00000450251 IGHV1-69DA0A0B4J2H0 117 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 C15orf62A8K5M9 175 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 UBE2L6O14933 153 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 AGFG2O95081 481 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 CRPP02741 224 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LMO1P25800 156 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 CD40P25942 277 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PPIFP30405 207 aaKnown RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 HIST1H4AP62805 103 aaKnown RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 CD69Q07108 199 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 ZFP36L1Q07352 338 aaKnown RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 TMEFF1Q8IYR6 380 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TMEM52Q8NDY8 209 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 NTN5Q8WTR8 489 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 HES7Q9BYE0 225 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 A0A0U1RQV1 116 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 K7ESM1 405 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 WNT9BO14905 357 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LEPROTO15243 131 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SCRG1O75711 98 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PRSS2P07478 247 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 FGF6P10767 208 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 GRNP28799 593 aaKnown RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 SEC61GP60059 68 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 RBM3P98179 157 aaKnown RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 SPEM2Q0P670 501 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 WFDC2Q14508 124 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TDRG1Q3Y452 100 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 ANXA2RQ3ZCQ2 193 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LINC01620Q4KN68 170 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SFTA2Q6UW10 78 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 MDP1Q86V88 176 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 PRR7Q8TB68 274 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 C20orf78Q9BR46 151 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 C11orf1Q9H5F2 150 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 C6orf106Q9H6K1 298 aaPredicted RBP1.8□□□□□ -2.12
USP53-202ENST00000450251 SCN1AP35498 2009 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TRBV25-1A0A075B6N4 114 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SMIM26A0A096LP01 95 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 TRAV3A0A0B4J244 114 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 A0A1B0GUS0 222 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 C2orf70A6NJV1 201 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 LTAP01374 205 aa1.8□□□□□ -2.12
USP53-202ENST00000450251 SLURP2P0DP57 97 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms