RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PRCDQ00LT1 54 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 FAM90A1Q86YD7 464 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 A0A0G2JLM5 398 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 LOXL3P58215 753 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 C1orf185Q5T7R7 199 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 SAMD13Q5VXD3 122 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
UBE3B-204ENST00000449510 MRPL32Q9BYC8 188 aaKnown RBP10.11□□□□□ -0.79
UBE3B-204ENST00000449510 SRRM4A7MD48 611 aaKnown RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 NPIPB11E5RHQ5 1161 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 ARMS2P0C7Q2 107 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 JKAMPQ9P055 326 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 SMIM13P0DJ93 91 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 BRWD1-AS2P59051 145 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 HIST1H1AQ02539 215 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 Q1RN00 199 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 TLN1Q9Y490 2541 aaKnown RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 PPIAL4EA0A075B759 164 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 SPAARA0A1B0GVQ0 90 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 PPIAL4FP0DN26 164 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 CFHR2P36980 270 aa10.1□□□□□ -0.79
UBE3B-204ENST00000449510 SRSF6Q13247 344 aaKnown RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-204ENST00000449510 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
UBE3B-204ENST00000449510 IGHV2-26A0A0B4J1V2 119 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 NPIPB5A8MRT5 1133 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 D6R8Y8 96 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 KIR3DS1Q14943 382 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 DAZAP2Q15038 168 aaPredicted RBP10.09□□□□□ -0.79
UBE3B-204ENST00000449510 CENPVQ7Z7K6 275 aaPredicted RBP10.09□□□□□ -0.79
UBE3B-204ENST00000449510 FOXC2Q99958 501 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 C19orf24Q9BVV8 132 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 IGHV1-24A0A0C4DH33 117 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
UBE3B-204ENST00000449510 ITGB1BP1O14713 200 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 KLK10O43240 276 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 ERVK11-1P61568 191 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 AMN1Q8IY45 258 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 SCNM1Q9BWG6 230 aa10.09□□□□□ -0.79
UBE3B-204ENST00000449510 A0A1B0GWB2 263 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 F5H697 171 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 BVES-AS1Q5T3Y7 98 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 GTSCR1Q86UQ5 136 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 DEFB124Q8NES8 71 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 Q8NFD4 153 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 ZNF257Q9Y2Q1 563 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 LY6G6EA0A0G2JKS1 128 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 IGLC7A0M8Q6 106 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 SCGB2A1O75556 95 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 NDUFA3O95167 84 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 Q8TCH9 128 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 U3KQA8 63 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 PTPRQQ9UMZ3 2332 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 HCFC1P51610 2035 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 IGHV1-18A0A0C4DH31 117 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 TCRBV4S1A1TA0A5B7 111 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 WISP2O76076 250 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 DKK1O94907 266 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 DIAPH2-AS1Q14236 149 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 SPRNQ5BIV9 151 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 SPANXN1Q5VSR9 72 aa10.08□□□□□ -0.8
UBE3B-204ENST00000449510 CEP295Q9C0D2 2601 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 SRRM5B3KS81 715 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 PRRG2O14669 202 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
UBE3B-204ENST00000449510 ZNF788Q6ZQV5 615 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-204ENST00000449510 Q8TAT8 98 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 MYOZ3Q8TDC0 251 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 TTTY13Q9BZ97 58 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 MRPL27Q9P0M9 148 aaKnown RBP10.07□□□□□ -0.8
UBE3B-204ENST00000449510 TRANK1O15050 2925 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 C21orf140B9A014 251 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 PROP1O75360 226 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 MGPP08493 103 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 IGFBPL1Q8WX77 278 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
UBE3B-204ENST00000449510 LINC00310P59036 64 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 TMEM213A2RRL7 107 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 APOMO95445 188 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 CACNG8Q8WXS5 425 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 IGHV2-70DA0A0C4DH43 119 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 TCRAP04437 139 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 TMEM186Q96B77 213 aa10.06□□□□□ -0.8
UBE3B-204ENST00000449510 SONP18583 2426 aaKnown RBP10.06□□□□□ -0.8
UBE3B-204ENST00000449510 DSPP15924 2871 aaKnown RBP10.06□□□□□ -0.8
UBE3B-204ENST00000449510 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-204ENST00000449510 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
UBE3B-204ENST00000449510 PRR33A8MZF0 331 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms