RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 HHLA3Q9XRX5 114 aa8.65□□□□□ -1.02
LINC00342-202ENST00000448494 EXPH5Q8NEV8 1989 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 TRBV7-3A0A075B6L6 115 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 M0R2P5 195 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 PEX7O00628 323 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 ACP1P24666 158 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 KRTAP27-1Q3LI81 207 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SPINK9Q5DT21 86 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 Q6ZQT7 251 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 HIST1H4GQ99525 98 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 OR2H1Q9GZK4 316 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 HCFC1P51610 2035 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
LINC00342-202ENST00000448494 K7EMI3 77 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SYNGR3O43761 229 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 CRYGSP22914 178 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 ZNF816Q0VGE8 651 aaPredicted RBP8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SLC22A18ASQ8N1D0 253 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 ZNF488Q96MN9 340 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 DKK2Q9UBU2 259 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 SPAG17Q6Q759 2223 aa8.64□□□□□ -1.03
LINC00342-202ENST00000448494 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 HSPB6O14558 160 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 OR2H2O95918 312 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 P01737 135 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 HHEXQ03014 270 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 LINC01559Q495D7 138 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 C10orf128Q5T292 105 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 FZR1Q9UM11 496 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 EIF4EBP1Q13541 118 aaPredicted RBP8.63□□□□□ -1.03
LINC00342-202ENST00000448494 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 NABP2Q9BQ15 211 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 PRRG4Q9BZD6 226 aa8.63□□□□□ -1.03
LINC00342-202ENST00000448494 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 IFI27P40305 119 aaPredicted RBP8.62□□□□□ -1.03
LINC00342-202ENST00000448494 GATA4P43694 442 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 HERVK_113P63121 156 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 LY6G5CQ5SRR4 150 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C9orf153Q5TBE3 101 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 CXCL17Q6UXB2 119 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C15orf53Q8NAA6 179 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C8orf88P0DMB2 117 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 RSPO4Q2I0M5 234 aaPredicted RBP8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C3orf22Q8N5N4 141 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 C3orf56Q8N813 242 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 OR13H1Q8NG92 308 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 NABP1Q96AH0 204 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 ODF3Q96PU9 254 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
LINC00342-202ENST00000448494 MYO9BQ13459 2157 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 PCSK5Q92824 1860 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 LINC01548A6NM66 108 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 NPYP01303 97 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 IGKCP01834 107 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 ORM1P02763 201 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 PPP1CAP62136 330 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 PAX8Q06710 450 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 LOXL1Q08397 574 aaPredicted RBP8.61□□□□□ -1.03
LINC00342-202ENST00000448494 ZNF329Q86UD4 541 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 DUX3Q96PT4 197 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 GFRA3O60609 400 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 IGKV3-11P04433 115 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 RIGQ13278 110 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 SLC25A48Q6ZT89 311 aaKnown RBP8.61□□□□□ -1.03
LINC00342-202ENST00000448494 RFESDQ8TAC1 157 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 CHCHD5Q9BSY4 110 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 MLST8Q9BVC4 326 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 EPDR1Q9UM22 224 aa8.61□□□□□ -1.03
LINC00342-202ENST00000448494 UQCRQO14949 82 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 TNFRSF6BO95407 300 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 CECR9P0C854 216 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 CCL26Q9Y258 94 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 RAXQ9Y2V3 346 aa8.6□□□□□ -1.03
LINC00342-202ENST00000448494 SPTBN5Q9NRC6 3674 aaKnown RBP8.6□□□□□ -1.03
LINC00342-202ENST00000448494 LOC107984156A0A0G2JMH3 177 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 TRBV7-7A0A0K0K1E9 115 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 ARL17AQ8IVW1 177 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 MKXQ8IYA7 352 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 FAM57AQ8TBR7 257 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 NPIPB3Q92617 1050 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 TRGV9Q99603 122 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 U3KQK5 164 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 A0A1B0GUT8 65 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 OTOL1A6NHN0 477 aaPredicted RBP8.59□□□□□ -1.03
LINC00342-202ENST00000448494 C17orf98A8MV24 154 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 H3BML4 177 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 FCER1GP30273 86 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
LINC00342-202ENST00000448494 UBE2L3P68036 154 aaKnown RBP8.59□□□□□ -1.03
LINC00342-202ENST00000448494 UTF1Q5T230 341 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms