RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
SF1-211ENST00000448404 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 C8orf31Q8N9H6 132 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 LRRK2Q5S007 2527 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 LOC105371242A0A075B767 164 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 NCBP2LA6PVI3 153 aaKnown RBP11.75□□□□□ -0.53
SF1-211ENST00000448404 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 GNLYP22749 145 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 HTR1DP28221 377 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 NDPQ00604 133 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 TEX45Q8NA69 505 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 OR4A5Q8NH83 315 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 IL36BQ9NZH7 164 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
SF1-211ENST00000448404 PGPA6NDG6 321 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 SNURFLB1AK76 121 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 FOXL1Q12952 345 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 C11orf71Q6IPW1 123 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 TYMSP04818 313 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 EXOC3-AS1Q8N2X6 119 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
SF1-211ENST00000448404 MRPL18Q9H0U6 180 aaKnown RBP11.74□□□□□ -0.53
SF1-211ENST00000448404 LINC00322Q6ZN03 302 aaPredicted RBP11.73□□□□□ -0.53
SF1-211ENST00000448404 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 F11RQ9Y624 299 aaKnown RBP11.73□□□□□ -0.53
SF1-211ENST00000448404 ABCA2Q9BZC7 2435 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 SLC25A5P05141 298 aaKnown RBP11.73□□□□□ -0.53
SF1-211ENST00000448404 UCNP55089 124 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 LINC00310P59036 64 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 IBA57Q5T440 356 aaKnown RBP11.73□□□□□ -0.53
SF1-211ENST00000448404 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 RNASE8Q8TDE3 154 aaKnown RBP11.73□□□□□ -0.53
SF1-211ENST00000448404 C9JCJ5 164 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 CD99P14209 185 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 Q6ZWC4 215 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 TIMD4Q96H15 378 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 DPM3Q9P2X0 92 aa11.73□□□□□ -0.53
SF1-211ENST00000448404 CRYGCP07315 174 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 COTL1Q14019 142 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 FAM120AOSQ5T036 256 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 SSX8Q7RTT4 187 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 LY6G5BQ8NDX9 201 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 CFHR4Q92496 578 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 A0A1W2PRE2 83 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 PEX7O00628 323 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 IGKV1-17P01599 117 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 BPIFB3P59826 476 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 CMTM2Q8TAZ6 248 aa11.72□□□□□ -0.53
SF1-211ENST00000448404 INS-IGF2F8WCM5 200 aa11.71□□□□□ -0.53
SF1-211ENST00000448404 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
SF1-211ENST00000448404 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
SF1-211ENST00000448404 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.53
SF1-211ENST00000448404 I3L2K1 104 aa11.71□□□□□ -0.54
SF1-211ENST00000448404 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.54
SF1-211ENST00000448404 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.54
SF1-211ENST00000448404 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.54
SF1-211ENST00000448404 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.54
SF1-211ENST00000448404 NAT8BQ9UHF3 227 aa11.71□□□□□ -0.54
SF1-211ENST00000448404 RNF114Q9Y508 228 aa11.71□□□□□ -0.54
SF1-211ENST00000448404 K7EIM0 57 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 HYPMO75409 117 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 GPR6P46095 362 aaPredicted RBP11.7□□□□□ -0.54
SF1-211ENST00000448404 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 OR1L4Q8NGR5 311 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 VAMP8Q9BV40 100 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 ZFP30Q9Y2G7 519 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 ABCA12Q86UK0 2595 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 NBR2O15453 112 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 SERF1AO75920 110 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 BPESC1Q9GZL8 116 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 EPG5Q9HCE0 2579 aa11.7□□□□□ -0.54
SF1-211ENST00000448404 VWC2LB2RUY7 222 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 CAMPP49913 170 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 CX3CL1P78423 397 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 IGFL4Q6B9Z1 124 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 ETFRF1Q6IPR1 90 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 Q6ZVH6 145 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 C8orf46Q8TAG6 207 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 ZNF586Q9NXT0 402 aa11.69□□□□□ -0.54
SF1-211ENST00000448404 SOX21Q9Y651 276 aaPredicted RBP11.69□□□□□ -0.54
SF1-211ENST00000448404 GP9P14770 177 aa11.68□□□□□ -0.54
SF1-211ENST00000448404 ATP5IP56385 69 aaPredicted RBP11.68□□□□□ -0.54
SF1-211ENST00000448404 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
SF1-211ENST00000448404 NUDT10Q8NFP7 164 aa11.68□□□□□ -0.54
SF1-211ENST00000448404 PERPQ96FX8 193 aa11.68□□□□□ -0.54
SF1-211ENST00000448404 NUDT11Q96G61 164 aa11.68□□□□□ -0.54
SF1-211ENST00000448404 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms