RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 M0R143 59 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 HYPMO75409 117 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 CD3EP07766 207 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 C3orf79P0CE67 100 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 PPIAL4GP0DN37 164 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 APOBEC3AP31941 199 aaPredicted RBP7.51□□□□□ -1.21
KLHL3-202ENST00000447439 MYCNOSP40205 109 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF124Q15973 351 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
KLHL3-202ENST00000447439 ASCL5Q7RTU5 278 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 PPP1R27Q86WC6 154 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 RPEQ96AT9 228 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 SCNM1Q9BWG6 230 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 Q9H3A6 140 aa7.51□□□□□ -1.21
KLHL3-202ENST00000447439 VSTM5A8MXK1 200 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF324O75467 553 aaPredicted RBP7.5□□□□□ -1.21
KLHL3-202ENST00000447439 HLA-DQA1P01909 254 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 MT-ND6P03923 174 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 GP9P14770 177 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 TFPI2P48307 235 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 ARF6P62330 175 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 TMEM183BQ1AE95 376 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 COX19Q49B96 90 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 FAM71F2Q6NXP2 309 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 MUC15Q8N387 334 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 GTSF1Q8WW33 167 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
KLHL3-202ENST00000447439 GRAMD2BQ96HH9 432 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 ATRXP46100 2492 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 TIMM23O14925 209 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CNIH1O95406 144 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CRYGCP07315 174 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CRYGBP07316 175 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 RAB4AP20338 218 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 LGALS7P47929 136 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CASP6P55212 293 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CLEC7AQ9BXN2 247 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 CLEC5AQ9NY25 188 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 KAAG1Q9UBP8 84 aa7.5□□□□□ -1.21
KLHL3-202ENST00000447439 IGHV3-23P01764 117 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 SPATA45Q537H7 98 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 OR10J3Q5JRS4 329 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 PRNTQ86SH4 94 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 TIMM8BQ9Y5J9 83 aaPredicted RBP7.49□□□□□ -1.21
KLHL3-202ENST00000447439 IGF2RP11717 2491 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 ZFHX3Q15911 3703 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF138P52744 262 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 PRRX1P54821 245 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 MMDQ15546 238 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 SPATA12Q7Z6I5 190 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 ARL6IP6Q8N6S5 226 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 TEX45Q8NA69 505 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
KLHL3-202ENST00000447439 F11RQ9Y624 299 aaKnown RBP7.49□□□□□ -1.21
KLHL3-202ENST00000447439 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 TCRAP04437 139 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 IGLC1P0CG04 106 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF25P17030 456 aaPredicted RBP7.48□□□□□ -1.21
KLHL3-202ENST00000447439 ZNF672Q499Z4 452 aaPredicted RBP7.48□□□□□ -1.21
KLHL3-202ENST00000447439 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 TMEM116Q8NCL8 245 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 C22orf15Q8WYQ4 148 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 TRGV9Q99603 122 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 MCRIP2Q9BUT9 160 aaKnown RBP7.48□□□□□ -1.21
KLHL3-202ENST00000447439 NGBQ9NPG2 151 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 HIGD1AQ9Y241 93 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 HRNRQ86YZ3 2850 aaPredicted RBP7.48□□□□□ -1.21
KLHL3-202ENST00000447439 B9A039 149 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 Q56UQ5 140 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 ETFRF1Q6IPR1 90 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 EBLN2Q6P2I7 272 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 GPR82Q96P67 336 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 SLC25A39Q9BZJ4 359 aaPredicted RBP7.48□□□□□ -1.21
KLHL3-202ENST00000447439 PTPRQQ9UMZ3 2332 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 MED13LQ71F56 2210 aa7.48□□□□□ -1.21
KLHL3-202ENST00000447439 M0R2Z0 102 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 HSBP1O75506 76 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 HIST1H1EP10412 219 aaKnown RBP7.47□□□□□ -1.21
KLHL3-202ENST00000447439 HES1Q14469 280 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 FAM231DQ6ZW35 169 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 C8orf46Q8TAG6 207 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 C20orf144Q9BQM9 153 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 ALKBH7Q9BT30 221 aaPredicted RBP7.47□□□□□ -1.21
KLHL3-202ENST00000447439 RPP21Q9H633 154 aaKnown RBP7.47□□□□□ -1.21
KLHL3-202ENST00000447439 I3L2K1 104 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 CCL21O00585 134 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 P01737 135 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 SSX8Q7RTT4 187 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 BORCS7Q96B45 105 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 TPPP3Q9BW30 176 aa7.47□□□□□ -1.21
KLHL3-202ENST00000447439 IGHV3-35A0A0C4DH35 117 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms