RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OTORQ9NRC9 128 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 CUL9Q8IWT3 2517 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 LHFPL4Q7Z7J7 247 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 TNFRSF14Q92956 283 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 ST20Q9HBF5 79 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 TMEM14CQ9P0S9 112 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 COX11Q9Y6N1 276 aa15.23■□□□□ 0.03
SDCBP-204ENST00000447182 OR4C46A6NHA9 309 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 FOXA3P55318 350 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-204ENST00000447182 TMEM190Q8WZ59 177 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 TMEM133Q9H2Q1 129 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 HIGD1AQ9Y241 93 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 SYS1-DBNDD2H3BUS1 97 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 HOXB4P17483 251 aaPredicted RBP15.22■□□□□ 0.03
SDCBP-204ENST00000447182 C16orf54Q6UWD8 224 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 Q86TA4 180 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 ZNF738Q8NE65 137 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 SIGLEC9Q9Y336 463 aa15.22■□□□□ 0.03
SDCBP-204ENST00000447182 F11RQ9Y624 299 aaKnown RBP15.22■□□□□ 0.03
SDCBP-204ENST00000447182 LOC102724200A0A096LPH7 203 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-204ENST00000447182 IGHV3-72A0A0B4J1Y9 119 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 TRBV6-1A0A0K0K1D8 114 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 SH2D7A6NKC9 451 aaPredicted RBP15.21■□□□□ 0.03
SDCBP-204ENST00000447182 HAX1O00165 279 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 THBDP07204 575 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 OR5AL1P0C617 328 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 LEMD1Q68G75 181 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 ZNF835Q9Y2P0 537 aa15.21■□□□□ 0.03
SDCBP-204ENST00000447182 A0A0G2JNJ9 132 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 CCL25O15444 150 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 LEPROTL1O95214 131 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 APOHP02749 345 aaPredicted RBP15.2■□□□□ 0.02
SDCBP-204ENST00000447182 UNQ5815/PRO19632Q6UWF5 114 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 Q9UFV3 132 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 BOD1L1Q8NFC6 3051 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 M0QZ24 198 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 IGLV2-11P01706 119 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 COL8A1P27658 744 aa15.2■□□□□ 0.02
SDCBP-204ENST00000447182 RP1L1Q8IWN7 2480 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-204ENST00000447182 CACNA1HO95180 2353 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 TEX22C9J3V5 150 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 H3BTX0 84 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 CHEK1O14757 476 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 IGLC1P0CG04 106 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 CD24P25063 80 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 CNTFRP26992 372 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 PTTG1IPP53801 180 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 UBE2V1Q13404 147 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 RNASE6Q93091 150 aaKnown RBP15.19■□□□□ 0.02
SDCBP-204ENST00000447182 OTOGLQ3ZCN5 2332 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 IGHV3-21A0A0B4J1V1 117 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 VSTM5A8MXK1 200 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 K7EM74 188 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 LIPFP07098 398 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 PSG1P11464 419 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 PRR31Q5SQ13 230 aa15.19■□□□□ 0.02
SDCBP-204ENST00000447182 SLC25A39Q9BZJ4 359 aaPredicted RBP15.19■□□□□ 0.02
SDCBP-204ENST00000447182 OVOL3O00110 214 aa15.18■□□□□ 0.02
SDCBP-204ENST00000447182 IGLV1-47P01700 117 aa15.18■□□□□ 0.02
SDCBP-204ENST00000447182 LINC00173Q6ZV60 143 aa15.18■□□□□ 0.02
SDCBP-204ENST00000447182 PPP1R27Q86WC6 154 aa15.18■□□□□ 0.02
SDCBP-204ENST00000447182 RBPJQ06330 500 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 GSX1Q9H4S2 264 aaPredicted RBP15.17■□□□□ 0.02
SDCBP-204ENST00000447182 SMG1Q96Q15 3661 aaKnown RBP15.17■□□□□ 0.02
SDCBP-204ENST00000447182 ROS1P08922 2347 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 TRAV8-1A0A0A6YYK1 113 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 APELAP0DMC3 54 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 LYZP61626 148 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 PET117Q6UWS5 81 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 CIARTQ8N365 385 aaPredicted RBP15.17■□□□□ 0.02
SDCBP-204ENST00000447182 TMEM191AQ9H0A3 160 aa15.17■□□□□ 0.02
SDCBP-204ENST00000447182 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.16■□□□□ 0.02
SDCBP-204ENST00000447182 PRSS33Q8NF86 280 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 JKAMPQ9P055 326 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 IGHV1-3A0A0C4DH29 117 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 I3L2K1 104 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 GOLT1AQ6ZVE7 132 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 GATD1Q8NB37 220 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 INSIG2Q9Y5U4 225 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 MALRD1Q5VYJ5 2156 aa15.16■□□□□ 0.02
SDCBP-204ENST00000447182 PRRG2O14669 202 aa15.15■□□□□ 0.02
SDCBP-204ENST00000447182 Q6ZVH6 145 aa15.15■□□□□ 0.02
SDCBP-204ENST00000447182 PRNTQ86SH4 94 aa15.15■□□□□ 0.02
SDCBP-204ENST00000447182 MAP1LC3CQ9BXW4 147 aa15.15■□□□□ 0.02
SDCBP-204ENST00000447182 RNF24Q9Y225 148 aa15.15■□□□□ 0.02
SDCBP-204ENST00000447182 ZNF785A8K8V0 405 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 EXOC3-AS1Q8N2X6 119 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 TMEM75Q8N9X5 138 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 RASL11BQ9BPW5 248 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 HSPB8Q9UJY1 196 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 A0A1B0GUT8 65 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 BUB1B-PAK6H3BSN5 160 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 SRSF8Q9BRL6 282 aaKnown RBP15.14■□□□□ 0.01
SDCBP-204ENST00000447182 DYNLRB1Q9NP97 96 aa15.14■□□□□ 0.01
SDCBP-204ENST00000447182 EP300Q09472 2414 aaPredicted RBP15.13■□□□□ 0.01
SDCBP-204ENST00000447182 CNOT1A5YKK6 2376 aaKnown RBP15.13■□□□□ 0.01
SDCBP-204ENST00000447182 IGHV2-70DA0A0C4DH43 119 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 HSBP1L1C9JCN9 74 aa15.13■□□□□ 0.01
SDCBP-204ENST00000447182 SLC25A34Q6PIV7 304 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms