RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 ID1P41134 155 aa13.07□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF705AQ6ZN79 300 aaPredicted RBP13.07□□□□□ -0.32
COL9A1-205ENST00000447041 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
COL9A1-205ENST00000447041 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
COL9A1-205ENST00000447041 SLC25A21Q9BQT8 299 aaPredicted RBP13.07□□□□□ -0.32
COL9A1-205ENST00000447041 TMED3Q9Y3Q3 217 aa13.07□□□□□ -0.32
COL9A1-205ENST00000447041 IGHV3OR16-12A0A075B7B8 117 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 DEFB131BA0A096LNP1 70 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 CCDC160A6NGH7 325 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-205ENST00000447041 WRBO00258 174 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 SYNGR2O43760 224 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 MED6O75586 246 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-205ENST00000447041 S100A5P33763 92 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 CCDC190Q86UF4 302 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 OR8I2Q8N0Y5 310 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 CIB3Q96Q77 187 aaPredicted RBP13.06□□□□□ -0.32
COL9A1-205ENST00000447041 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
COL9A1-205ENST00000447041 F6UB75 175 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 H3BP45 60 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 AMBPP02760 352 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 GGNBP1Q5YKI7 109 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 OR4B1Q8NGF8 309 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 NEU1Q99519 415 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 SLC35B3Q9H1N7 401 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 DNAH2Q9P225 4427 aa13.05□□□□□ -0.32
COL9A1-205ENST00000447041 GATA2P23769 480 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-205ENST00000447041 EMP1P54849 157 aa13.04□□□□□ -0.32
COL9A1-205ENST00000447041 SPANXN5Q5MJ07 72 aa13.04□□□□□ -0.32
COL9A1-205ENST00000447041 TMEM182Q6ZP80 229 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-205ENST00000447041 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
COL9A1-205ENST00000447041 SLC25A22Q9H936 323 aa13.04□□□□□ -0.32
COL9A1-205ENST00000447041 ISLRO14498 428 aa13.03□□□□□ -0.32
COL9A1-205ENST00000447041 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
COL9A1-205ENST00000447041 ACOT7LQ6ZUV0 252 aa13.03□□□□□ -0.32
COL9A1-205ENST00000447041 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
COL9A1-205ENST00000447041 CLUHP3Q96NS8 147 aa13.03□□□□□ -0.32
COL9A1-205ENST00000447041 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
COL9A1-205ENST00000447041 HERC2O95714 4834 aa13.02□□□□□ -0.32
COL9A1-205ENST00000447041 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.32
COL9A1-205ENST00000447041 ZNF98A6NK75 572 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 ADAP1O75689 374 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 PAX9P55771 341 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 AKR1C1Q04828 323 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 FAM78BQ5VT40 261 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 C16orf92Q96LL3 132 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 SRRQ9GZT4 340 aa13.02□□□□□ -0.33
COL9A1-205ENST00000447041 A0A0J9YX75 114 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 CFDP00746 253 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-205ENST00000447041 ORM2P19652 201 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 GALR1P47211 349 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 PSG9Q00887 426 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 BPIFCQ8NFQ6 507 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 RPRMQ9NS64 109 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 SLC45A2Q9UMX9 530 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
COL9A1-205ENST00000447041 RFNGQ9Y644 331 aa13.01□□□□□ -0.33
COL9A1-205ENST00000447041 C9orf170A2RU37 121 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 TMEM189A5PLL7 270 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 SMIM9A6NGZ8 99 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 MEOX2P50222 304 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 UBE2MP61081 183 aaKnown RBP13□□□□□ -0.33
COL9A1-205ENST00000447041 POLR2GP62487 172 aaKnown RBP eCLIP13□□□□□ -0.33
COL9A1-205ENST00000447041 BAK1Q16611 211 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 C1orf158Q8N1D5 194 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 OR1B1Q8NGR6 318 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 RSG1Q9BU20 258 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 FLVCR2Q9UPI3 526 aa13□□□□□ -0.33
COL9A1-205ENST00000447041 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 FAM222AQ5U5X8 452 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 TMEM147Q9BVK8 224 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 DOK5Q9P104 306 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 DKK2Q9UBU2 259 aa12.99□□□□□ -0.33
COL9A1-205ENST00000447041 SMCO3A2RU48 225 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 NDUFB6O95139 128 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 ID3Q02535 119 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 IGFL4Q6B9Z1 124 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 TMEM144Q7Z5S9 345 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 OR4D5Q8NGN0 318 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
COL9A1-205ENST00000447041 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 PLA2G2EQ9NZK7 142 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
COL9A1-205ENST00000447041 PMS2P5A8MQ11 134 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 A8MTW9 85 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 H3BRN7 92 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 SSSCA1O60232 199 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 CCNKO75909 580 aa12.97□□□□□ -0.33
COL9A1-205ENST00000447041 P0DMU3 169 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms