RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 MBNL3Q9NUK0 354 aaKnown RBP6.51□□□□□ -1.37
SMG1-202ENST00000446231 SIVA1O15304 175 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 RNFT1Q5M7Z0 435 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 GFRA4Q9GZZ7 299 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 BRCA1P38398 1863 aaKnown RBP6.5□□□□□ -1.37
SMG1-202ENST00000446231 CEACAM3P40198 252 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 SHISA5Q8N114 240 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 WFDC12Q8WWY7 111 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 METTL26Q96S19 204 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 PATJQ8NI35 1801 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 DUTP33316 252 aaKnown RBP6.5□□□□□ -1.37
SMG1-202ENST00000446231 B5MCH6 92 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 PRCDQ00LT1 54 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 A0A1W2PQM1 296 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 ASCL2Q99929 193 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 H7C1H1 209 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 VWA8A3KMH1 1905 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 INSIG2Q9Y5U4 225 aa6.5□□□□□ -1.37
SMG1-202ENST00000446231 ZIC4Q8N9L1 334 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 K7EN84 100 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 RAB1BQ9H0U4 201 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 TFF2Q03403 129 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 C20orf204Q6ZNR8 217 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 PSG8Q9UQ74 426 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 TRAV17A0A0B4J275 112 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 MAGEA5P43359 124 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 C11orf52Q96A22 123 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 PGPEP1Q9NXJ5 209 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 TICRRQ7Z2Z1 1910 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 ARPC1AQ92747 370 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 A0A0G2JRQ6 117 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 E9PLN8 166 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 WISP1O95388 367 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 PRTN3P24158 256 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 LMO1P25800 156 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 NABP1Q96AH0 204 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 AHDC1Q5TGY3 1603 aaPredicted RBP6.49□□□□□ -1.37
SMG1-202ENST00000446231 TANC1Q9C0D5 1861 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 ZNF56Q15929 161 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 CT55Q8WUE5 264 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 IGHV3-72A0A0B4J1Y9 119 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 AMTNQ6UX39 209 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 TRGV9Q99603 122 aa6.49□□□□□ -1.37
SMG1-202ENST00000446231 CD69Q07108 199 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 OSR1Q8TAX0 266 aaPredicted RBP6.48□□□□□ -1.37
SMG1-202ENST00000446231 IGHV1OR15-9A0A0B4J2B8 117 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 C9orf172C9J069 976 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 MNX1P50219 401 aaPredicted RBP6.48□□□□□ -1.37
SMG1-202ENST00000446231 WFDC2Q14508 124 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 ZNF562Q6V9R5 426 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 PARP14Q460N5 1801 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 TEX45Q8NA69 505 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 HS3ST6Q96QI5 342 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 VGLL1Q99990 258 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 LINC01565O15544 149 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 TMEM78Q5T7P6 136 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 IGHV1-45A0A0A0MS14 117 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 TCRAP04437 139 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
SMG1-202ENST00000446231 FAM53AQ6NSI3 398 aaPredicted RBP6.48□□□□□ -1.37
SMG1-202ENST00000446231 WNT2P09544 360 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 CRYBA4P53673 196 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 FXYD7P58549 80 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 CENPVQ7Z7K6 275 aaPredicted RBP6.48□□□□□ -1.37
SMG1-202ENST00000446231 TCRBV4S1A1TA0A5B7 111 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 OR13C6PQ8NH95 151 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 JMJD8Q96S16 334 aa6.48□□□□□ -1.37
SMG1-202ENST00000446231 MFAP4P55083 255 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 ATXN8Q156A1 80 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 IGLL5B9A064 214 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 CFAP161Q6P656 301 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 SAA2P0DJI9 122 aaPredicted RBP6.47□□□□□ -1.37
SMG1-202ENST00000446231 EBLN2Q6P2I7 272 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 OR10J6PQ8NGY7 276 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 FSCN3Q9NQT6 498 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 J3QW42 95 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 FAM90A1Q86YD7 464 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 C2orf82Q6UX34 121 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 SLC25A39Q9BZJ4 359 aaPredicted RBP6.47□□□□□ -1.37
SMG1-202ENST00000446231 PCOLCEQ15113 449 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 C8orf46Q8TAG6 207 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 MGAMO43451 1857 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 TEX48A0A1B0GUV7 120 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 CCL4P13236 92 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 C1orf122Q6ZSJ8 110 aa6.47□□□□□ -1.37
SMG1-202ENST00000446231 ZNF524Q96C55 264 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms