RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PRDM13Q9H4Q3 707 aa6.48□□□□□ -1.37
RIF1-205ENST00000444746 TRAV26-2A0A0B4J265 109 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 AMBPP02760 352 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 HAPLN4Q86UW8 402 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 COL25A1Q9BXS0 654 aaPredicted RBP6.47□□□□□ -1.37
RIF1-205ENST00000444746 CACNA1IQ9P0X4 2223 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 COTL1Q14019 142 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 MBD3L1Q8WWY6 194 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 TMEM101Q96IK0 257 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 SRRM4A7MD48 611 aaKnown RBP6.47□□□□□ -1.37
RIF1-205ENST00000444746 ZNF726P1Q15940 193 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 LINC00469Q8N7U9 141 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 KLHL30-AS1Q8NEE0 82 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 TRAV12-2A0A075B6T6 113 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 TRBV9A0A0B4J1U6 114 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 A0A1W2PPI3 338 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 CD28P10747 220 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 HLA-DMBP28068 263 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 MDC1Q14676 2089 aaKnown RBP6.47□□□□□ -1.37
RIF1-205ENST00000444746 TMEM8BA6NDV4 472 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
RIF1-205ENST00000444746 SCGB1A1P11684 91 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 TMEM95Q3KNT9 176 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 AMN1Q8IY45 258 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 Q96MF0 132 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 PEMTQ9UBM1 199 aa6.47□□□□□ -1.37
RIF1-205ENST00000444746 MPZP25189 248 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 C17orf58Q2M2W7 97 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 TMEM14EPQ6UXP3 125 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 NUP35Q8NFH5 326 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 A0A096LPF7 62 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 SPSB3Q6PJ21 355 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 C12orf54Q6X4T0 127 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 HIST3H2BBQ8N257 126 aa6.46□□□□□ -1.37
RIF1-205ENST00000444746 C1orf147Q96MC9 270 aaPredicted RBP6.46□□□□□ -1.37
RIF1-205ENST00000444746 FGF23Q9GZV9 251 aaPredicted RBP6.46□□□□□ -1.37
RIF1-205ENST00000444746 A0A087WWC5 75 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 C5orf64Q2M2E5 130 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 CHTOPQ9Y3Y2 248 aaKnown RBP6.46□□□□□ -1.38
RIF1-205ENST00000444746 SOX21Q9Y651 276 aaPredicted RBP6.46□□□□□ -1.38
RIF1-205ENST00000444746 TRGV1A0A0A0MS02 117 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 A0A1B0GWJ7 208 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 PAX9P55771 341 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 FOXL2NBQ6ZUU3 175 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 SPTBP11277 2137 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 A0A1B0GWB2 263 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 A0A1W2PRE2 83 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 NUTF2P61970 127 aaKnown RBP6.46□□□□□ -1.38
RIF1-205ENST00000444746 C17orf77Q96MU5 243 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 FAM215AQ9Y5M1 114 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 IGHV3-38A0A0C4DH36 116 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 TTC9CQ8N5M4 171 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 RCHY1Q96PM5 261 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 RALGAPA2Q2PPJ7 1873 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 COX6CP09669 75 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 RAB9AP51151 201 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 CHCHD5Q9BSY4 110 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 SPCS1Q9Y6A9 102 aa6.46□□□□□ -1.38
RIF1-205ENST00000444746 TRAV21A0A0B4J279 112 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 A0A087X0K7 114 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 TSKUQ8WUA8 353 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 ANKRD36A6QL64 1941 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 A6NJY4 79 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
RIF1-205ENST00000444746 RITA1Q96K30 269 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 VCX2Q9H322 139 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 MSRB2Q9Y3D2 182 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 DEFB130BP0DP73 79 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 DEFB130AP0DP74 79 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 XCL2Q9UBD3 114 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 TRIOBPQ9H2D6 2365 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 K7ENP7 123 aa6.45□□□□□ -1.38
RIF1-205ENST00000444746 NDUFS6O75380 124 aaKnown RBP6.45□□□□□ -1.38
RIF1-205ENST00000444746 DEFB131AP59861 70 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
RIF1-205ENST00000444746 LAMTOR2Q9Y2Q5 125 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 FAM90A2PQ658T7 463 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 ZNF815PA8K554 130 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 F6UB75 175 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 ARMS2P0C7Q2 107 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 MEGF9Q9H1U4 602 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 A0A1W2PNU3 283 aaPredicted RBP6.44□□□□□ -1.38
RIF1-205ENST00000444746 CFHR2P36980 270 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
RIF1-205ENST00000444746 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
RIF1-205ENST00000444746 DNAJC13O75165 2243 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 TRBV7-9A0A0J9YWB2 115 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 MALP21145 153 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 LOXP28300 417 aaPredicted RBP6.44□□□□□ -1.38
RIF1-205ENST00000444746 TMEM75Q8N9X5 138 aa6.44□□□□□ -1.38
RIF1-205ENST00000444746 SLC50A1Q9BRV3 221 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms