RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZNF705AQ6ZN79 300 aaPredicted RBP15.12■□□□□ 0.01
VSX1-206ENST00000444511 THAP8Q8NA92 274 aa15.12■□□□□ 0.01
VSX1-206ENST00000444511 OR4B1Q8NGF8 309 aa15.12■□□□□ 0.01
VSX1-206ENST00000444511 DEDD2Q8WXF8 326 aa15.12■□□□□ 0.01
VSX1-206ENST00000444511 NEU1Q99519 415 aa15.12■□□□□ 0.01
VSX1-206ENST00000444511 MAGT1Q9H0U3 335 aa15.12■□□□□ 0.01
VSX1-206ENST00000444511 IGKV1OR2-108A0A075B7D4 117 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 ZNF705FA8MVS1 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-206ENST00000444511 WRBO00258 174 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 ISLRO14498 428 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 SYNGR2O43760 224 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 CFDP00746 253 aaPredicted RBP15.11■□□□□ 0.01
VSX1-206ENST00000444511 AMBPP02760 352 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 HOXB5P09067 269 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 ZNF705DP0CH99 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-206ENST00000444511 ZNF705BP0CI00 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-206ENST00000444511 ZNF79Q15937 498 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 SAMD13Q5VXD3 122 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 SPATA31B1PQ5VZV4 182 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 GGNBP1Q5YKI7 109 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 EBLN2Q6P2I7 272 aa15.11■□□□□ 0.01
VSX1-206ENST00000444511 TMEM189A5PLL7 270 aa15.1■□□□□ 0.01
VSX1-206ENST00000444511 SMIM9A6NGZ8 99 aa15.1■□□□□ 0.01
VSX1-206ENST00000444511 EMP1P54849 157 aa15.1■□□□□ 0.01
VSX1-206ENST00000444511 GSG1LQ6UXU4 331 aa15.1■□□□□ 0.01
VSX1-206ENST00000444511 CLUHP3Q96NS8 147 aa15.1■□□□□ 0.01
VSX1-206ENST00000444511 SPART-AS1P0CW21 52 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 GALR1P47211 349 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 MEOX2P50222 304 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 SPANXN5Q5MJ07 72 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 ZNF709Q8N972 641 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 C16orf92Q96LL3 132 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 SLC25A22Q9H936 323 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 RFNGQ9Y644 331 aa15.09■□□□□ 0.01
VSX1-206ENST00000444511 DNAH10Q8IVF4 4471 aa15.08■□□□□ 0.01
VSX1-206ENST00000444511 VPS13DQ5THJ4 4388 aa15.08■□□□□ 0
VSX1-206ENST00000444511 PRSS46E5RG02 174 aa15.08■□□□□ 0
VSX1-206ENST00000444511 PSG9Q00887 426 aa15.08■□□□□ 0
VSX1-206ENST00000444511 AKR1C1Q04828 323 aa15.08■□□□□ 0
VSX1-206ENST00000444511 FAM78BQ5VT40 261 aa15.08■□□□□ 0
VSX1-206ENST00000444511 CCDC190Q86UF4 302 aa15.08■□□□□ 0
VSX1-206ENST00000444511 BPIFCQ8NFQ6 507 aa15.08■□□□□ 0
VSX1-206ENST00000444511 NDUFAF3Q9BU61 184 aa15.08■□□□□ 0
VSX1-206ENST00000444511 SLC35B3Q9H1N7 401 aa15.08■□□□□ 0
VSX1-206ENST00000444511 RPRMQ9NS64 109 aa15.08■□□□□ 0
VSX1-206ENST00000444511 SLC45A2Q9UMX9 530 aa15.08■□□□□ 0
VSX1-206ENST00000444511 F6UB75 175 aa15.07■□□□□ 0
VSX1-206ENST00000444511 H3BP45 60 aa15.07■□□□□ 0
VSX1-206ENST00000444511 ORM2P19652 201 aa15.07■□□□□ 0
VSX1-206ENST00000444511 PAX9P55771 341 aa15.07■□□□□ 0
VSX1-206ENST00000444511 RSG1Q9BU20 258 aa15.07■□□□□ 0
VSX1-206ENST00000444511 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
VSX1-206ENST00000444511 SLC25A32Q9H2D1 315 aa15.07■□□□□ 0
VSX1-206ENST00000444511 GOLT1BQ9Y3E0 138 aa15.07■□□□□ 0
VSX1-206ENST00000444511 STRAPQ9Y3F4 350 aaKnown RBP15.07■□□□□ 0
VSX1-206ENST00000444511 A0A0J9YX75 114 aa15.06■□□□□ 0
VSX1-206ENST00000444511 ZNF98A6NK75 572 aa15.06■□□□□ 0
VSX1-206ENST00000444511 P0DMU3 169 aa15.06■□□□□ 0
VSX1-206ENST00000444511 FAM231AP0DMU4 169 aa15.06■□□□□ 0
VSX1-206ENST00000444511 FAM231CP0DMU5 169 aa15.06■□□□□ 0
VSX1-206ENST00000444511 S100A7P31151 101 aa15.06■□□□□ 0
VSX1-206ENST00000444511 UBE2MP61081 183 aaKnown RBP15.06■□□□□ 0
VSX1-206ENST00000444511 C7orf50Q9BRJ6 194 aaKnown RBP15.06■□□□□ 0
VSX1-206ENST00000444511 TMEM147Q9BVK8 224 aa15.06■□□□□ 0
VSX1-206ENST00000444511 TEX48A0A1B0GUV7 120 aa15.05■□□□□ -0
VSX1-206ENST00000444511 GATA2P23769 480 aaPredicted RBP15.05■□□□□ -0
VSX1-206ENST00000444511 INPP1P49441 399 aa15.05■□□□□ -0
VSX1-206ENST00000444511 SPANXN2Q5MJ10 180 aa15.05■□□□□ -0
VSX1-206ENST00000444511 ACOT7LQ6ZUV0 252 aa15.05■□□□□ -0
VSX1-206ENST00000444511 OR1B1Q8NGR6 318 aa15.05■□□□□ -0
VSX1-206ENST00000444511 ADAP1O75689 374 aa15.04■□□□□ -0
VSX1-206ENST00000444511 HBE1P02100 147 aa15.04■□□□□ -0
VSX1-206ENST00000444511 OR4D5Q8NGN0 318 aa15.04■□□□□ -0
VSX1-206ENST00000444511 C20orf173Q96LM9 149 aa15.04■□□□□ -0
VSX1-206ENST00000444511 GPR82Q96P67 336 aa15.04■□□□□ -0
VSX1-206ENST00000444511 DOK5Q9P104 306 aa15.04■□□□□ -0
VSX1-206ENST00000444511 C9orf170A2RU37 121 aa15.03■□□□□ -0
VSX1-206ENST00000444511 SMCO3A2RU48 225 aa15.03■□□□□ -0
VSX1-206ENST00000444511 POLR2GP62487 172 aaKnown RBP eCLIP15.03■□□□□ -0
VSX1-206ENST00000444511 FAM222AQ5U5X8 452 aa15.03■□□□□ -0
VSX1-206ENST00000444511 TMEM182Q6ZP80 229 aaPredicted RBP15.03■□□□□ -0
VSX1-206ENST00000444511 POM121L12Q8N7R1 296 aa15.03■□□□□ -0
VSX1-206ENST00000444511 DKK2Q9UBU2 259 aa15.03■□□□□ -0
VSX1-206ENST00000444511 ID3Q02535 119 aa15.02■□□□□ -0
VSX1-206ENST00000444511 TRIQKQ629K1 86 aa15.02■□□□□ -0
VSX1-206ENST00000444511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.02■□□□□ -0
VSX1-206ENST00000444511 TMEM144Q7Z5S9 345 aa15.02■□□□□ -0
VSX1-206ENST00000444511 C1orf158Q8N1D5 194 aa15.02■□□□□ -0
VSX1-206ENST00000444511 NIPSNAP3BQ9BS92 247 aa15.02■□□□□ -0
VSX1-206ENST00000444511 SRRQ9GZT4 340 aa15.02■□□□□ -0
VSX1-206ENST00000444511 PSENENQ9NZ42 101 aa15.02■□□□□ -0
VSX1-206ENST00000444511 LOC102723971A0A1B0GUV8 181 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 NAP1L6A6NFF2 107 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 NDUFB6O95139 128 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 IFNA21P01568 189 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 IL5P05113 134 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 RRN3P1Q2M238 152 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 CYP2G1PQ6ZSU1 146 aa15.01□□□□□ -0.01
VSX1-206ENST00000444511 LINC00336Q6ZUF6 198 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms