RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 FAM90A2PQ658T7 463 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 RNF114Q9Y508 228 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 MALRD1Q5VYJ5 2156 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TRAV41A0A0B4J266 112 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 LHX2P50458 406 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 TEX38Q6PEX7 206 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 OCC1Q8TAD7 63 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 NPIPB5A8MRT5 1133 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 RSPO4Q2I0M5 234 aaPredicted RBP5.54□□□□□ -1.52
USP46-201ENST00000441222 HEPN1Q6WQI6 88 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 IMMP1LQ96LU5 166 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 ZNF48Q96MX3 618 aaPredicted RBP5.54□□□□□ -1.52
USP46-201ENST00000441222 RFNGQ9Y644 331 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 LY96Q9Y6Y9 160 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 FRMPD3Q5JV73 1810 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 COL11A2P13942 1736 aaPredicted RBP5.54□□□□□ -1.52
USP46-201ENST00000441222 IGLV3-19P01714 112 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 WBP1Q96G27 269 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 GGTLC1Q9BX51 225 aa5.54□□□□□ -1.52
USP46-201ENST00000441222 A0A1B0GW64 132 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 A0A1W2PR77 199 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 FAM223BA6NKX1 122 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RAMP1O60894 148 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RFPL3SP0C7P2 107 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 NEGR1Q7Z3B1 354 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 FAM223AQ8IWN6 122 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RNF166Q96A37 237 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 ZSWIM8A7E2V4 1837 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 M0R1W7 72 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 CD300EQ496F6 205 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 ZNF876PQ49A33 203 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 IGLV3-32A0A0A0MS00 114 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 Q5BKY6 102 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 KLF17Q5JT82 389 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 PKIGQ9Y2B9 76 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 TICRRQ7Z2Z1 1910 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 FOXL2P58012 376 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 GNG5P63218 68 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 SPRED2Q7Z698 418 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 ID3Q02535 119 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 C15orf32Q32M92 178 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 GFI1BQ5VTD9 330 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 ASCL4Q6XD76 172 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 IL17RELQ6ZVW7 336 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RNF126Q9BV68 326 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 WDR83OSQ9Y284 106 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 IGLV3-12A0A075B6K2 115 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 EREGO14944 169 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RAMP3O60896 148 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 GREB1LQ9C091 1923 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 ADAMTS7Q9UKP4 1686 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 PTPRQQ9UMZ3 2332 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 RNF222A6NCQ9 220 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 GATA2P23769 480 aaPredicted RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 PDE6HQ13956 83 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 OCIAD2Q56VL3 154 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
USP46-201ENST00000441222 MRPL27Q9P0M9 148 aaKnown RBP5.53□□□□□ -1.52
USP46-201ENST00000441222 LRRC37AA6NMS7 1700 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 CCL3L1P16619 93 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 CSRP1P21291 193 aaKnown RBP5.52□□□□□ -1.53
USP46-201ENST00000441222 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 NRXN2Q9P2S2 1712 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 A0A1B0GTI1 187 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 SRRM4A7MD48 611 aaKnown RBP5.52□□□□□ -1.53
USP46-201ENST00000441222 TIMM23O14925 209 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 SAP30O75446 220 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 TIAF1O95411 115 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 WFDC6Q9BQY6 131 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 A0A0G2JMZ2 1700 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 LRRC37A2A6NM11 1700 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 KIAA1549Q9HCM3 1950 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 OBSL1O75147 1896 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 A0A1B0GWJ7 208 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 PMS2P5A8MQ11 134 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 RHODO00212 210 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 ESDP10768 282 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 CD33P20138 364 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 BCL6BQ8N143 479 aaPredicted RBP5.52□□□□□ -1.53
USP46-201ENST00000441222 TRGV1A0A0A0MS02 117 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 TRAV5A0A0B4J249 113 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 TRAV40A0A0B4J280 105 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 B4DSR2 109 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 LY6G5BQ8NDX9 201 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 SNHG12Q9BXW3 62 aa5.52□□□□□ -1.53
USP46-201ENST00000441222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.52□□□□□ -1.53
USP46-201ENST00000441222 C9orf106Q8NAJ2 232 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms