RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
CPSF7-205ENST00000439958 LOXL1Q08397 574 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-205ENST00000439958 RHEBQ15382 184 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
CPSF7-205ENST00000439958 TMEM250H0YL14 139 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 SRSF8Q9BRL6 282 aaKnown RBP11.8□□□□□ -0.52
CPSF7-205ENST00000439958 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
CPSF7-205ENST00000439958 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 AMY1AP04745 511 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 SLC25A39Q9BZJ4 359 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-205ENST00000439958 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-205ENST00000439958 GGTLC3B5MD39 225 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 SCGB2A1O75556 95 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 RNF2Q99496 336 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 C19orf24Q9BVV8 132 aa11.8□□□□□ -0.52
CPSF7-205ENST00000439958 ZNF320A2RRD8 509 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 PGPA6NDG6 321 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 RPL35P42766 123 aaKnown RBP11.79□□□□□ -0.52
CPSF7-205ENST00000439958 RPS10P46783 165 aaKnown RBP11.79□□□□□ -0.52
CPSF7-205ENST00000439958 RPL15P61313 204 aaKnown RBP11.79□□□□□ -0.52
CPSF7-205ENST00000439958 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 IGKV3-7A0A075B6H7 116 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 F6UZH7 168 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 FAM167A-AS1Q96KT0 104 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
CPSF7-205ENST00000439958 H7BYZ3 331 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-205ENST00000439958 FAM110DQ8TAY7 271 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-205ENST00000439958 SERTAD4Q9NUC0 356 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 HOXA3O43365 443 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-205ENST00000439958 RPL23P62829 140 aaKnown RBP11.78□□□□□ -0.52
CPSF7-205ENST00000439958 ATP5G2Q06055 141 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 HELTA6NFD8 242 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 MT-ND4LP03901 98 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 OR5I1Q13606 314 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 ASCL2Q99929 193 aa11.78□□□□□ -0.52
CPSF7-205ENST00000439958 A0A096LNT2 108 aa11.77□□□□□ -0.52
CPSF7-205ENST00000439958 EXOC3-AS1Q8N2X6 119 aa11.77□□□□□ -0.52
CPSF7-205ENST00000439958 KLK15Q9H2R5 256 aa11.77□□□□□ -0.52
CPSF7-205ENST00000439958 GNG4P50150 75 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 CMTM2Q8TAZ6 248 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 YAE1D1Q9NRH1 226 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF491Q8N8L2 437 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 OR4F17Q8NGA8 305 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 C17orf77Q96MU5 243 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
CPSF7-205ENST00000439958 SORL1Q92673 2214 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 PSMB11A5LHX3 300 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
CPSF7-205ENST00000439958 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 Q71RC1 249 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-205ENST00000439958 TGIF2-C20orf24A0A0A6YYL0 155 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
CPSF7-205ENST00000439958 CENPWQ5EE01 88 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 EEF1AKMT3Q96AZ1 226 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 TRAV30A0A087WSZ9 112 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 A6NDX4 124 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 CRYBA1P05813 215 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 CTSGP08311 255 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 UBE2G1P62253 170 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 C10orf99Q6UWK7 81 aa11.76□□□□□ -0.53
CPSF7-205ENST00000439958 TRBV20OR9-2A0A075B6H5 130 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 HIST2H2BDQ6DRA6 164 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 BPIFA4PQ86YQ2 179 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 CR1P17927 2039 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 J3QLI3 93 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 AP4M1O00189 453 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 SPINK4O60575 86 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 HIST1H1BP16401 226 aaKnown RBP11.75□□□□□ -0.53
CPSF7-205ENST00000439958 ADMP35318 185 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 OCC1Q8TAD7 63 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
CPSF7-205ENST00000439958 TOMM40O96008 361 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 CLDN34H7C241 214 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 CNN1P51911 297 aaKnown RBP11.74□□□□□ -0.53
CPSF7-205ENST00000439958 LRRC75A-AS1Q8N1F1 130 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 FAM3BP58499 235 aaPredicted RBP11.74□□□□□ -0.53
CPSF7-205ENST00000439958 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 Q9H3A6 140 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 RABAC1Q9UI14 185 aa11.74□□□□□ -0.53
CPSF7-205ENST00000439958 TRAV8-1A0A0A6YYK1 113 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 M0QZK8 103 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 ZNF785A8K8V0 405 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 SLC17A3O00476 420 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 S100PP25815 95 aa11.73□□□□□ -0.53
CPSF7-205ENST00000439958 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
CPSF7-205ENST00000439958 BMPR1BO00238 502 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms