RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 ZNF714Q96N38 554 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 WDFY4Q6ZS81 3184 aa7.32□□□□□ -1.24
COPB1-202ENST00000439561 TMEM265A0A087WTH1 108 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 KLK10O43240 276 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 DLX1P56177 255 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 DEFB109BQ30KR1 87 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 PET117Q6UWS5 81 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 PRSS57Q6UWY2 283 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 PATE2Q6UY27 113 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 C1orf210Q8IVY1 113 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 RASL11BQ9BPW5 248 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 DYNLRB1Q9NP97 96 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 MRPL36Q9P0J6 103 aaKnown RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 RPUSD1Q9UJJ7 312 aaKnown RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 ABCA4P78363 2273 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 CD5LO43866 347 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 TCRAP04437 139 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 PRSS1P07477 247 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 RPL27AP46776 148 aaKnown RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 SMIM12Q96EX1 92 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 TPSG1Q9NRR2 321 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 AKAP6Q13023 2319 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 RIF1Q5UIP0 2472 aaKnown RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 A1L4Q6 167 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 PRR33A8MZF0 331 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 VWC2LB2RUY7 222 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 NDUFB3O43676 98 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 TNFRSF1AP19438 455 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 SRSF6Q13247 344 aaKnown RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 KLF5Q13887 457 aaPredicted RBP7.31□□□□□ -1.24
COPB1-202ENST00000439561 MSMPQ1L6U9 139 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 FAM231DQ6ZW35 169 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
COPB1-202ENST00000439561 ACACAQ13085 2346 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 WIPF2Q8TF74 440 aaPredicted RBP7.3□□□□□ -1.24
COPB1-202ENST00000439561 FMC1Q96HJ9 113 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 GNG7O60262 68 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 OR2J3O76001 311 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 CFHR2P36980 270 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 IFI27P40305 119 aaPredicted RBP7.3□□□□□ -1.24
COPB1-202ENST00000439561 OR2K2Q8NGT1 345 aa7.3□□□□□ -1.24
COPB1-202ENST00000439561 HES1Q14469 280 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 ZNF414Q96IQ9 312 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 TRAV17A0A0B4J275 112 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 FNDC10F2Z333 226 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 CKS2P33552 79 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 KIR3DS1Q14943 382 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 MBNL2Q5VZF2 373 aaKnown RBP7.29□□□□□ -1.24
COPB1-202ENST00000439561 SLC25A48Q6ZT89 311 aaKnown RBP7.29□□□□□ -1.24
COPB1-202ENST00000439561 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 MBD6Q96DN6 1003 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 ADAMTS20P59510 1910 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 IGHV3OR16-8A0A075B7F1 116 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 A0A0G2JLM5 398 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 A0A1W2PPI3 338 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 D6R8Y8 96 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 SMKR1H3BMG3 65 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 GOSR1O95249 250 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 NCR2O95944 276 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 FABP2P12104 132 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 GLRXP35754 106 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 FAM27E3Q08E93 113 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 TWIST1Q15672 202 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 UBALD2Q8IYN6 164 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 FER1L6-AS1Q8NA97 138 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 GAFA1Q96PS6 74 aa7.29□□□□□ -1.24
COPB1-202ENST00000439561 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 M0R3E3 92 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
COPB1-202ENST00000439561 ATP5IP56385 69 aaPredicted RBP7.28□□□□□ -1.24
COPB1-202ENST00000439561 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 RABAC1Q9UI14 185 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 URB1-AS1Q96HZ7 61 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 AAMDCQ9H7C9 122 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 SCRT2Q9NQ03 307 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 ZNF71Q9NQZ8 489 aaPredicted RBP7.28□□□□□ -1.24
COPB1-202ENST00000439561 INSIG2Q9Y5U4 225 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 SOX21Q9Y651 276 aaPredicted RBP7.28□□□□□ -1.24
COPB1-202ENST00000439561 MALRD1Q5VYJ5 2156 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 TMEM189A5PLL7 270 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 M0R296 226 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 ORM1P02763 201 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 SCGB2A2Q13296 93 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 AMN1Q8IY45 258 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 FBXL15Q9H469 300 aa7.28□□□□□ -1.24
COPB1-202ENST00000439561 A0A1W2PNU3 283 aaPredicted RBP7.27□□□□□ -1.25
COPB1-202ENST00000439561 Q86TA4 180 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 OR5AN1Q8NGI8 311 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 OR1N2Q8NGR9 330 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 CSTL1Q9H114 145 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 JKAMPQ9P055 326 aa7.27□□□□□ -1.25
COPB1-202ENST00000439561 TMEM213A2RRL7 107 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms