RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TNCP24821 2201 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 SPTBN1Q01082 2364 aaKnown RBP6.91□□□□□ -1.3
HPS4-206ENST00000439453 ITPR2Q14571 2701 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 J3QR89 54 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 KIR2DL2P43627 348 aaPredicted RBP6.91□□□□□ -1.3
HPS4-206ENST00000439453 PRCDQ00LT1 54 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 LRRC29Q8WV35 223 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 LEAP2Q969E1 77 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 ZC2HC1AQ96GY0 325 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
HPS4-206ENST00000439453 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 A1L4Q6 167 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 PSMB11A5LHX3 300 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 F2RL2O00254 374 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 COL8A1P27658 744 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 RND1Q92730 232 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 PAXXQ9BUH6 204 aa6.91□□□□□ -1.3
HPS4-206ENST00000439453 UNC79Q9P2D8 2635 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 C7orf71A4D174 169 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 LIPFP07098 398 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 OR5AL1P0C617 328 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 TIMM8AO60220 97 aaPredicted RBP6.9□□□□□ -1.3
HPS4-206ENST00000439453 SAA2P0DJI9 122 aaPredicted RBP6.9□□□□□ -1.3
HPS4-206ENST00000439453 GNG5P63218 68 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 C2orf83Q53S99 150 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 FER1L6-AS1Q8NA97 138 aa6.9□□□□□ -1.3
HPS4-206ENST00000439453 CR1LQ2VPA4 569 aa6.9□□□□□ -1.31
HPS4-206ENST00000439453 FBXL19-AS1Q494R0 122 aa6.9□□□□□ -1.31
HPS4-206ENST00000439453 H1FXQ92522 213 aaKnown RBP6.9□□□□□ -1.31
HPS4-206ENST00000439453 FZR1Q9UM11 496 aa6.9□□□□□ -1.31
HPS4-206ENST00000439453 ZNF257Q9Y2Q1 563 aa6.9□□□□□ -1.31
HPS4-206ENST00000439453 IGKV1D-17A0A075B6S4 117 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 FAM231BA6NCW3 169 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 UPK2O00526 184 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 MGST3O14880 152 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ARF6P62330 175 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 CD69Q07108 199 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 POU2AF1Q16633 256 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 CT45A1Q5HYN5 189 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 S100A7AQ86SG5 101 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 CT45A3Q8NHU0 189 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 SELENOKQ9Y6D0 94 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 TEX50A0A1B0GTY4 177 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 CHEK1O14757 476 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 COX7A2P2O60397 106 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 RNASE2P10153 161 aaKnown RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 COX8AP10176 69 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 FOXE3Q13461 319 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 OR1B1Q8NGR6 318 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 SGK494Q96LW2 274 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 PMCHL2Q9BQD1 86 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 SOX21Q9Y651 276 aaPredicted RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 LYZL6O75951 148 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 IGHV1-2P23083 117 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 HTR1DP28221 377 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ZNF137PP52743 207 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ZNF138P52744 262 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ATP5IP56385 69 aaPredicted RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 SEC11AP67812 179 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 C10orf113Q5VZT2 155 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 BPIFA4PQ86YQ2 179 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 GTSF1Q8WW33 167 aa6.89□□□□□ -1.31
HPS4-206ENST00000439453 FNDC4Q9H6D8 234 aaPredicted RBP6.89□□□□□ -1.31
HPS4-206ENST00000439453 A8MWL6 223 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 PPIAL4DF5H284 164 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 NBEAP1P0C6P0 100 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 LINC01545Q5VT33 79 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 ZNF474Q6S9Z5 364 aaPredicted RBP6.88□□□□□ -1.31
HPS4-206ENST00000439453 PPP1R35Q8TAP8 253 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 ADTRPQ96IZ2 230 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 FAM90A27PA6NNH2 459 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 SNAI2O43623 268 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 CIDEAO60543 219 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 HOXC12P31275 282 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 SSBP2P81877 361 aaPredicted RBP6.88□□□□□ -1.31
HPS4-206ENST00000439453 PAX2Q02962 417 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 LINC00322Q6ZN03 302 aaPredicted RBP6.88□□□□□ -1.31
HPS4-206ENST00000439453 FXYD5Q96DB9 178 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 NDFIP1Q9BT67 221 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 ZNF430Q9H8G1 570 aaPredicted RBP6.88□□□□□ -1.31
HPS4-206ENST00000439453 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 IGHV3OR15-7A0A075B7D8 119 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 G3V4G9 280 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 SLC25A5P05141 298 aaKnown RBP6.88□□□□□ -1.31
HPS4-206ENST00000439453 CSN3P07498 182 aa6.88□□□□□ -1.31
HPS4-206ENST00000439453 C22orf34Q6ZV56 151 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms