RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 BLNKQ8WV28 456 aa13.11□□□□□ -0.31
CLCNKA-203ENST00000439316 GPR82Q96P67 336 aa13.11□□□□□ -0.31
CLCNKA-203ENST00000439316 NGBQ9NPG2 151 aa13.11□□□□□ -0.31
CLCNKA-203ENST00000439316 HYPMO75409 117 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 CRYGBP07316 175 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 NBEAP1P0C6P0 100 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 C11orf42Q8N5U0 333 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 C22orf15Q8WYQ4 148 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 CLEC7AQ9BXN2 247 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 ARFGEF3Q5TH69 2177 aa13.1□□□□□ -0.31
CLCNKA-203ENST00000439316 IGHV3-72A0A0B4J1Y9 119 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 HSBP1O75506 76 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 TOMM40O96008 361 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 UQCRFS1P47985 274 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 PLP1P60201 277 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 BATFQ16520 125 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 CT83Q5H943 113 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 C5orf17Q8NAS9 161 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 PRSS22Q9GZN4 317 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 TMEM133Q9H2Q1 129 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 RPP21Q9H633 154 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 FAM181BA6NEQ2 426 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 LTAP01374 205 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 COL5A1-AS1Q5SY13 56 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 FMC1Q96HJ9 113 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 WNT10AQ9GZT5 417 aa13.09□□□□□ -0.31
CLCNKA-203ENST00000439316 LRBAP50851 2863 aa13.08□□□□□ -0.32
CLCNKA-203ENST00000439316 GNLYP22749 145 aa13.08□□□□□ -0.32
CLCNKA-203ENST00000439316 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-203ENST00000439316 CAMPP49913 170 aa13.08□□□□□ -0.32
CLCNKA-203ENST00000439316 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
CLCNKA-203ENST00000439316 C19orf71A6NCJ1 209 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 HBBP68871 147 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 MMDQ15546 238 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 LINC00322Q6ZN03 302 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 OR8B3Q8NGG8 313 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 SGK494Q96LW2 274 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 OR8B2Q96RD0 313 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 RPH3ALQ9UNE2 315 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 SOX21Q9Y651 276 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 M0R2Z0 102 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 TCRAP04437 139 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 CNTFRP26992 372 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 LHFPL4Q7Z7J7 247 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 C8orf46Q8TAG6 207 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 Q9H3A6 140 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 GOLT1BQ9Y3E0 138 aa13.07□□□□□ -0.32
CLCNKA-203ENST00000439316 FLNCQ14315 2725 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 VSTM5A8MXK1 200 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 HNRNPA3P51991 378 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 Q6ZN92 141 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 TXN2Q99757 166 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 DYNLRB1Q9NP97 96 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 SIGLEC9Q9Y336 463 aa13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 SPTAN1Q13813 2472 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-203ENST00000439316 A8MWL6 223 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 F11RQ9Y624 299 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 PLXNB1O43157 2135 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 IGHV2-26A0A0B4J1V2 119 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 C2orf70A6NJV1 201 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 IGLV1-47P01700 117 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 P01737 135 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 NPSP0C0P6 89 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 BTF3P20290 206 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 ATOH7Q8N100 152 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 GFRA4Q9GZZ7 299 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
CLCNKA-203ENST00000439316 E7EQL1 145 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 CD3EP07766 207 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 APELAP0DMC3 54 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 LEMD1Q68G75 181 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 OR2D3Q8NGH3 330 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 HIGD1AQ9Y241 93 aa13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 HRNRQ86YZ3 2850 aaPredicted RBP13.04□□□□□ -0.32
CLCNKA-203ENST00000439316 TRAV9-2A0A087WT02 112 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 IGHV1-69-2A0A0G2JMI3 117 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 C20orf202A1L168 122 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 H3BTX0 84 aa13.03□□□□□ -0.32
CLCNKA-203ENST00000439316 LINC00614P0C842 121 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 744.9 ms