RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ERMAPQ96PL5 475 aaPredicted RBP1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 TRIM4Q9C037 500 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 XAGE1AQ9HD64 81 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 SPTBN1Q01082 2364 aaKnown RBP1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 DAPK1P53355 1430 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 VPS8Q8N3P4 1428 aa1.42□□□□□ -2.18
TRAPPC13-204ENST00000438419 IGHV3-64A0A075B6Q5 118 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 TRAV38-1A0A0B4J264 116 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 SMIM9A6NGZ8 99 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF860A6NHJ4 632 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 LOC730098B7Z3J9 87 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 LGALS1P09382 135 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 CTXN2P0C2S0 81 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 HIST1H1TP22492 207 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 PSMB8P28062 276 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 TPI1P60174 286 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 CCL7P80098 99 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 KCNJ8Q15842 424 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF791Q3KP31 576 aaPredicted RBP1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 LYZL1Q6UWQ5 148 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 OR5B17Q8NGF7 314 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 CHMP6Q96FZ7 201 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 ULBP3Q9BZM4 244 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 VCX3BQ9H321 246 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 EFCAB1Q9HAE3 211 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 CISHQ9NSE2 258 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 RSL24D1Q9UHA3 163 aaKnown RBP1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 FUT9Q9Y231 359 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 APC2O95996 2303 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 ACACAQ13085 2346 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 ZNF532Q9HCE3 1301 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 NUP155O75694 1391 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 RTL9Q8NET4 1388 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 COL6A6A6NMZ7 2263 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 VWFP04275 2813 aa1.41□□□□□ -2.18
TRAPPC13-204ENST00000438419 RTTNQ86VV8 2226 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 A0A087WUJ7 227 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 PQLC2LA1A4F0 135 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 PGLYRP1O75594 196 aaPredicted RBP1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 ATP5HO75947 161 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 HLA-DRB1P01911 266 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 PPBPP02775 128 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 HLA-DMBP28068 263 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 ALDH3A1P30838 453 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 RPL5P46777 297 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 RAB14P61106 215 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 SNRPD2P62316 118 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 REEP5Q00765 189 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 GLO1Q04760 184 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 Q6ZS49 121 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 ANKRD29Q8N6D5 301 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 OR8B12Q8NGG6 310 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 ACOT12Q8WYK0 555 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 PRAP1Q96NZ9 151 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 WDR61Q9GZS3 305 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 IL36BQ9NZH7 164 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 MRPL27Q9P0M9 148 aaKnown RBP1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 TIMM22Q9Y584 194 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.18
TRAPPC13-204ENST00000438419 MGAQ8IWI9 3026 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 AHCTF1Q8WYP5 2266 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 MEGF8Q7Z7M0 2845 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 FANCMQ8IYD8 2048 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 GGT3PA6NGU5 568 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 OR4C46A6NHA9 309 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 FAAHO00519 579 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 TTRP02766 147 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 IFNA6P05013 189 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 MSNP26038 577 aaKnown RBP1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 DEFA1P59665 94 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 ERVS71-1P61550 626 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 EDDM3AQ14507 147 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 KRTAP13-4Q3LI77 160 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 C9orf64Q5T6V5 341 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 LPCAT3Q6P1A2 487 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 KTN1-AS1Q86SY8 53 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 ZNF676Q8N7Q3 588 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 SLC7A6Q92536 515 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 DOHHQ9BU89 302 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 OR8D2Q9GZM6 311 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 PRTFDC1Q9NRG1 225 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 PRELID3BQ9Y3B1 194 aa1.4□□□□□ -2.19
TRAPPC13-204ENST00000438419 LAMA1P25391 3075 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 ROCK1Q13464 1354 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 BIRC6Q9NR09 4857 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 CR1P17927 2039 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 FREM1Q5H8C1 2179 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 MED13LQ71F56 2210 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 COL4A1P02462 1669 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 CSPG4Q6UVK1 2322 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 NBASA2RRP1 2371 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 ATMQ13315 3056 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 IGHV1-18A0A0C4DH31 117 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 ZNF705FA8MVS1 300 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 H7C2G1 150 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 FADS1O60427 444 aa1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 NOS1APO75052 506 aaPredicted RBP1.39□□□□□ -2.19
TRAPPC13-204ENST00000438419 CNIH1O95406 144 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms