RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 NPVFQ9HCQ7 196 aa13.12□□□□□ -0.31
NCSTN-208ENST00000438008 FBXL17Q9UF56 701 aa13.12□□□□□ -0.31
NCSTN-208ENST00000438008 LSM5Q9Y4Y9 91 aaKnown RBP13.12□□□□□ -0.31
NCSTN-208ENST00000438008 SMCO3A2RU48 225 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 SPRY2O43597 315 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 DEDDO75618 318 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 ZNF688P0C7X2 276 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 RRAS2P62070 204 aaPredicted RBP13.11□□□□□ -0.31
NCSTN-208ENST00000438008 ARL16Q0P5N6 197 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 RNF183Q96D59 192 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 MGAT4CQ9UBM8 478 aa13.11□□□□□ -0.31
NCSTN-208ENST00000438008 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-208ENST00000438008 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-208ENST00000438008 SELENOTP62341 195 aa13.1□□□□□ -0.31
NCSTN-208ENST00000438008 LYL1P12980 280 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 S100A7P31151 101 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 PLP1P60201 277 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 RAB32Q13637 225 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 TEPPQ6URK8 271 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
NCSTN-208ENST00000438008 ZNF98A6NK75 572 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 ORM2P19652 201 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 BCAP31P51572 246 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 CAV2P51636 162 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
NCSTN-208ENST00000438008 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
NCSTN-208ENST00000438008 STHQ8IWL8 128 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 TMEM147Q9BVK8 224 aa13.08□□□□□ -0.32
NCSTN-208ENST00000438008 LYRM2Q9NU23 88 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-208ENST00000438008 FAM24AA6NFZ4 105 aa13.07□□□□□ -0.32
NCSTN-208ENST00000438008 S100A10P60903 97 aa13.07□□□□□ -0.32
NCSTN-208ENST00000438008 PSMG4Q5JS54 123 aa13.07□□□□□ -0.32
NCSTN-208ENST00000438008 OR1B1Q8NGR6 318 aa13.07□□□□□ -0.32
NCSTN-208ENST00000438008 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 SOCS3O14543 225 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 GOSR2O14653 212 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 HYPMO75409 117 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 LINC00869P0C866 280 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 SLC38A11Q08AI6 406 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 IL17DQ8TAD2 202 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 GATAD1Q8WUU5 269 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 GPR82Q96P67 336 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 NMES1Q9C002 83 aa13.06□□□□□ -0.32
NCSTN-208ENST00000438008 H3BRN7 92 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 CST7O76096 145 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 SIX6O95475 246 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 GALR1P47211 349 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 SULT1A1P50225 295 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 ACTL10Q5JWF8 245 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 SAMD13Q5VXD3 122 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 MORN3Q6PF18 240 aaPredicted RBP13.05□□□□□ -0.32
NCSTN-208ENST00000438008 ZNF546Q86UE3 836 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 TMEM252Q8N6L7 170 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 SLC25A39Q9BZJ4 359 aaPredicted RBP13.05□□□□□ -0.32
NCSTN-208ENST00000438008 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
NCSTN-208ENST00000438008 AGPAT2O15120 278 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
NCSTN-208ENST00000438008 SPP1P10451 314 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 S100A11P31949 105 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 ID1P41134 155 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 PSMB3P49720 205 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 MEOX2P50222 304 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 RAP2BP61225 183 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 CYCSP99999 105 aaKnown RBP13.04□□□□□ -0.32
NCSTN-208ENST00000438008 VWC2Q2TAL6 325 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 PXDC1Q5TGL8 231 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 S100A7AQ86SG5 101 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 SLC25A22Q9H936 323 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 DOK5Q9P104 306 aa13.04□□□□□ -0.32
NCSTN-208ENST00000438008 IGSF23A1L1A6 192 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 ISLRO14498 428 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
NCSTN-208ENST00000438008 STX12Q86Y82 276 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 TMEM217Q8N7C4 229 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 MGST2Q99735 147 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 SCRT1Q9BWW7 348 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 UQCC1Q9NVA1 299 aa13.03□□□□□ -0.32
NCSTN-208ENST00000438008 KMT2CQ8NEZ4 4911 aaKnown RBP13.02□□□□□ -0.32
NCSTN-208ENST00000438008 H3BMM0 161 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 RLN2P04090 185 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 OR5G3P0C626 314 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 ATF4P18848 351 aaPredicted RBP13.02□□□□□ -0.33
NCSTN-208ENST00000438008 H2BFSP57053 126 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 HBG1P69891 147 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 HBG2P69892 147 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 RAB31Q13636 194 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 ZFAND6Q6FIF0 208 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 PATE2Q6UY27 113 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 RSG1Q9BU20 258 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
NCSTN-208ENST00000438008 A0A0J9YWU9 116 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms