RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TNFRSF19Q9NS68 423 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 PPP1R14DQ9NXH3 145 aa12.51□□□□□ -0.41
SCARF1-203ENST00000434376 TRAV8-1A0A0A6YYK1 113 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 B9A039 149 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 LSM4Q9Y4Z0 139 aaKnown RBP12.5□□□□□ -0.41
SCARF1-203ENST00000434376 A0A1W2PS18 150 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 FBLN7Q53RD9 439 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 C10orf113Q5VZT2 155 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 ADORA2A-AS1P86434 159 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 LDLRAD2Q5SZI1 272 aa12.5□□□□□ -0.41
SCARF1-203ENST00000434376 OSR1Q8TAX0 266 aaPredicted RBP12.5□□□□□ -0.41
SCARF1-203ENST00000434376 TECRQ9NZ01 308 aaKnown RBP12.5□□□□□ -0.41
SCARF1-203ENST00000434376 MPDU1O75352 247 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 MFAP2P55001 183 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 CR1LQ2VPA4 569 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 TMEM155Q4W5P6 130 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 ARL2-SNX15V9GYD0 113 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 M0R2Z0 102 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 GAGE1Q13065 139 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 APCSP02743 223 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
SCARF1-203ENST00000434376 COMPP49747 757 aaPredicted RBP12.49□□□□□ -0.41
SCARF1-203ENST00000434376 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
SCARF1-203ENST00000434376 OR8B3Q8NGG8 313 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 OR8B2Q96RD0 313 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 VPS25Q9BRG1 176 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 PAXXQ9BUH6 204 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 MCRIP2Q9BUT9 160 aaKnown RBP12.49□□□□□ -0.41
SCARF1-203ENST00000434376 NDUFA4L2Q9NRX3 87 aa12.49□□□□□ -0.41
SCARF1-203ENST00000434376 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 DLL1O00548 723 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 MUC21Q5SSG8 566 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 TMEM186Q96B77 213 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 ZNF503Q96F45 646 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 MSRB2Q9Y3D2 182 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 A0A1W2PPR1 153 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 M0QZ24 198 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 ZNF324O75467 553 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-203ENST00000434376 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 IGLC3P0DOY3 106 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 TMEM11P17152 192 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 TCTAP57738 103 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 SELENOTP62341 195 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 MEF2CQ06413 473 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-203ENST00000434376 Q71RC1 249 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-203ENST00000434376 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-203ENST00000434376 KCNS1Q96KK3 526 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 BET1LQ9NYM9 111 aa12.48□□□□□ -0.41
SCARF1-203ENST00000434376 PGPA6NDG6 321 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 CA7P43166 264 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 FAM168AQ92567 244 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 CLEC5AQ9NY25 188 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 ANKRD17O75179 2603 aaKnown RBP12.47□□□□□ -0.41
SCARF1-203ENST00000434376 NDUFB8O95169 186 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 C8orf88P0DMB2 117 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-203ENST00000434376 IGFL4Q6B9Z1 124 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 V9GYV3 84 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 DOPEY1Q5JWR5 2465 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 PRRX1P54821 245 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 KLHDC1Q8N7A1 406 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 C22orf15Q8WYQ4 148 aa12.47□□□□□ -0.41
SCARF1-203ENST00000434376 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.41
SCARF1-203ENST00000434376 SUB1P53999 127 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCARF1-203ENST00000434376 KLRB1Q12918 225 aa12.46□□□□□ -0.41
SCARF1-203ENST00000434376 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.41
SCARF1-203ENST00000434376 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
SCARF1-203ENST00000434376 A0A1W2PN81 502 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 PRR20EP86478 221 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 PRR20CP86479 221 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 PRR20DP86480 221 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 PRR20BP86481 221 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 PRR20AP86496 221 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 OR2D3Q8NGH3 330 aa12.46□□□□□ -0.42
SCARF1-203ENST00000434376 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.42
SCARF1-203ENST00000434376 BMPR1BO00238 502 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF137PP52743 207 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 TAS2R45P59539 299 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 VSTM2AQ8TAG5 236 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 CORO2AQ92828 525 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 CORTO00230 105 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 ISLRO14498 428 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 SLAQ13239 276 aa12.45□□□□□ -0.42
SCARF1-203ENST00000434376 PATE2Q6UY27 113 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms