RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CD79AP11912 226 aa3□□□□□ -1.93
USP54-206ENST00000433394 SLC25A16P16260 332 aa3□□□□□ -1.93
USP54-206ENST00000433394 ZNF22P17026 224 aaPredicted RBP3□□□□□ -1.93
USP54-206ENST00000433394 COL8A2P25067 703 aa3□□□□□ -1.93
USP54-206ENST00000433394 S100A7P31151 101 aa3□□□□□ -1.93
USP54-206ENST00000433394 CCR2P41597 374 aa3□□□□□ -1.93
USP54-206ENST00000433394 NCALDP61601 193 aa3□□□□□ -1.93
USP54-206ENST00000433394 RHOBP62745 196 aa3□□□□□ -1.93
USP54-206ENST00000433394 MESTQ5EB52 335 aa3□□□□□ -1.93
USP54-206ENST00000433394 SCXQ7RTU7 201 aa3□□□□□ -1.93
USP54-206ENST00000433394 MSRB3Q8IXL7 192 aa3□□□□□ -1.93
USP54-206ENST00000433394 FAM24BQ8N5W8 94 aa3□□□□□ -1.93
USP54-206ENST00000433394 ST6GALNAC3Q8NDV1 305 aa3□□□□□ -1.93
USP54-206ENST00000433394 MS4A6EQ96DS6 147 aa3□□□□□ -1.93
USP54-206ENST00000433394 DIRAS2Q96HU8 199 aa3□□□□□ -1.93
USP54-206ENST00000433394 C14orf144Q96I85 54 aa3□□□□□ -1.93
USP54-206ENST00000433394 MAP1LC3BQ9GZQ8 125 aa3□□□□□ -1.93
USP54-206ENST00000433394 DCSTAMPQ9H295 470 aa3□□□□□ -1.93
USP54-206ENST00000433394 OR51I1Q9H343 314 aa3□□□□□ -1.93
USP54-206ENST00000433394 POPDC3Q9HBV1 291 aa3□□□□□ -1.93
USP54-206ENST00000433394 CALML5Q9NZT1 146 aa3□□□□□ -1.93
USP54-206ENST00000433394 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
USP54-206ENST00000433394 JPT1Q9UK76 154 aa3□□□□□ -1.93
USP54-206ENST00000433394 BAIAP2Q9UQB8 552 aa3□□□□□ -1.93
USP54-206ENST00000433394 MRPS16Q9Y3D3 137 aaKnown RBP3□□□□□ -1.93
USP54-206ENST00000433394 ZNF106Q9H2Y7 1883 aaKnown RBP3□□□□□ -1.93
USP54-206ENST00000433394 TTC28Q96AY4 2481 aa3□□□□□ -1.93
USP54-206ENST00000433394 SDK2Q58EX2 2172 aa3□□□□□ -1.93
USP54-206ENST00000433394 A0A0D9SEW6 157 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 C20orf202A1L168 122 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 H3BQF6 201 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 MRASO14807 208 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 HMGB3O15347 200 aaKnown RBP2.99□□□□□ -1.93
USP54-206ENST00000433394 GADD45GO95257 159 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 APODP05090 189 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 ATP5G1P05496 136 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 HLA-DQB2P05538 268 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 IGHV3-30-3P0DP02 117 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 CPMP14384 443 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 SPI1P17947 270 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 CD200P41217 278 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 RRAS2P62070 204 aaPredicted RBP2.99□□□□□ -1.93
USP54-206ENST00000433394 HERVK_113P63121 156 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 FABP5Q01469 135 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 TMEM267Q0VDI3 215 aaPredicted RBP2.99□□□□□ -1.93
USP54-206ENST00000433394 HTR4Q13639 388 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 KCNJ8Q15842 424 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 PLPPR5Q32ZL2 321 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 MRPL51Q4U2R6 128 aaKnown RBP2.99□□□□□ -1.93
USP54-206ENST00000433394 AKR1C8PQ5T2L2 129 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 C22orf39Q6P5X5 142 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 ZNF322Q6U7Q0 402 aaPredicted RBP2.99□□□□□ -1.93
USP54-206ENST00000433394 SDIM1Q6ZPB5 146 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 ZNF676Q8N7Q3 588 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 OR1L8Q8NGR8 309 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 OR13C4Q8NGS5 318 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 TERB2Q8NHR7 220 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 ULBP3Q9BZM4 244 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 SMDT1Q9H4I9 107 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 LRTM1Q9HBL6 345 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 CCL26Q9Y258 94 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 POLR1DQ9Y2S0 133 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 CACNA1DQ01668 2161 aa2.99□□□□□ -1.93
USP54-206ENST00000433394 TRPM6Q9BX84 2022 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 A0A087WUJ7 227 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 BORCS7-ASMTA0A0B4J1R7 106 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 A0A1B0GV50 99 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 LOC102725191A0A1B0GVB3 256 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 C1QCP02747 245 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 DBIP07108 87 aaKnown RBP2.98□□□□□ -1.93
USP54-206ENST00000433394 HTR1AP08908 422 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 RPS3P23396 243 aaKnown RBP eCLIP2.98□□□□□ -1.93
USP54-206ENST00000433394 ZNF140P52738 457 aaPredicted RBP2.98□□□□□ -1.93
USP54-206ENST00000433394 PSG4Q00888 419 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 ZNF117Q03924 483 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 BATFQ16520 125 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 TEX36Q5VZQ5 186 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 OR10K2Q6IF99 312 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 NAA40Q86UY6 237 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 OR4D11Q8NGI4 311 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 OR10D4PQ8NGN7 298 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 CANT1Q8WVQ1 401 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 MBD3L1Q8WWY6 194 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 KLF6Q99612 283 aaPredicted RBP2.98□□□□□ -1.93
USP54-206ENST00000433394 HSPB9Q9BQS6 159 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 TMEM70Q9BUB7 260 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 EFCAB11Q9BUY7 163 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 PBDC1Q9BVG4 233 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 NKX6-2Q9C056 277 aaPredicted RBP2.98□□□□□ -1.93
USP54-206ENST00000433394 TMEM126AQ9H061 195 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 TXNL4BQ9NX01 149 aaKnown RBP2.98□□□□□ -1.93
USP54-206ENST00000433394 SZT2Q5T011 3432 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 C5orf42Q9H799 3197 aa2.98□□□□□ -1.93
USP54-206ENST00000433394 REV3LO60673 3130 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 ZDBF2Q9HCK1 2354 aa2.97□□□□□ -1.93
USP54-206ENST00000433394 MUC22E2RYF6 1773 aaPredicted RBP2.97□□□□□ -1.93
USP54-206ENST00000433394 A0A1W2PNM2 257 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms