RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SUMO1P63165 101 aaKnown RBP13.1□□□□□ -0.31
USHBP1-203ENST00000431146 PYY3Q5JQD4 70 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 Q8WTZ3 238 aa13.1□□□□□ -0.31
USHBP1-203ENST00000431146 HSBP1L1C9JCN9 74 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 G3V318 75 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 CRYBB3P26998 211 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 ELOBQ15370 118 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 LY6EQ16553 131 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 HIST2H2BCQ6DN03 193 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 ZNF469Q96JG9 3925 aaPredicted RBP13.09□□□□□ -0.31
USHBP1-203ENST00000431146 CXCL1P09341 107 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 RAB5AP20339 215 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 C16orf82Q7Z2V1 217 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
USHBP1-203ENST00000431146 TGIF2-C20orf24A0A0A6YYL0 155 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 GOLT1BQ9Y3E0 138 aa13.08□□□□□ -0.32
USHBP1-203ENST00000431146 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
USHBP1-203ENST00000431146 GNG7O60262 68 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 AMY1AP04745 511 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 Q56UQ5 140 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 CFAP161Q6P656 301 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 MEGF9Q9H1U4 602 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 LINC00527Q9UJ94 153 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 HIGD1AQ9Y241 93 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 CR1P17927 2039 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 H3BTX0 84 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 CLDN34H7C241 214 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 PLP1P60201 277 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 FBXL7Q9UJT9 491 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 MOB4Q9Y3A3 225 aa13.07□□□□□ -0.32
USHBP1-203ENST00000431146 MDFIC2A0A1B0GVS7 189 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 H3BUX3 64 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 MFAP4P55083 255 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-203ENST00000431146 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 ELOVL1Q9BW60 279 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 HELZ2Q9BYK8 2649 aaKnown RBP13.06□□□□□ -0.32
USHBP1-203ENST00000431146 CXorf65A6NEN9 183 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 TGFAP01135 160 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 OCC1Q8TAD7 63 aa13.06□□□□□ -0.32
USHBP1-203ENST00000431146 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
USHBP1-203ENST00000431146 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
USHBP1-203ENST00000431146 DLEU1O43261 78 aa13.05□□□□□ -0.32
USHBP1-203ENST00000431146 IL4P05112 153 aa13.05□□□□□ -0.32
USHBP1-203ENST00000431146 RANP62826 216 aaKnown RBP13.05□□□□□ -0.32
USHBP1-203ENST00000431146 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
USHBP1-203ENST00000431146 TMEM242Q9NWH2 141 aa13.05□□□□□ -0.32
USHBP1-203ENST00000431146 THYN1Q9P016 225 aa13.05□□□□□ -0.32
USHBP1-203ENST00000431146 Q5PR19 223 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 ZNF491Q8N8L2 437 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 MS4A10Q96PG2 267 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 H7BYZ3 331 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 TOMM40O96008 361 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 GP9P14770 177 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 S100A2P29034 98 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 RPS10P46783 165 aaKnown RBP13.04□□□□□ -0.32
USHBP1-203ENST00000431146 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 LINC00479Q96M42 142 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
USHBP1-203ENST00000431146 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
USHBP1-203ENST00000431146 IGHV3-35A0A0C4DH35 117 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 K7EN84 100 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 HOXA5P20719 270 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 C15orf32Q32M92 178 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 HELTA6NFD8 242 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 GATA3P23771 443 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-203ENST00000431146 RHOGP84095 191 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-203ENST00000431146 NOL4LQ96MY1 436 aaPredicted RBP13.03□□□□□ -0.32
USHBP1-203ENST00000431146 CHRDL1Q9BU40 450 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
USHBP1-203ENST00000431146 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
USHBP1-203ENST00000431146 GNG5P63218 68 aa13.02□□□□□ -0.33
USHBP1-203ENST00000431146 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
USHBP1-203ENST00000431146 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.33
USHBP1-203ENST00000431146 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
USHBP1-203ENST00000431146 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 GALR1P47211 349 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 WI2-2373I1.2A0A1W2PRP0 233 aa13.01□□□□□ -0.33
USHBP1-203ENST00000431146 M0QZK8 103 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms