RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DEFB104AQ8WTQ1 72 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
RIF1-204ENST00000430328 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
RIF1-204ENST00000430328 C18orf12Q96KH6 178 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 FXYD7P58549 80 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 LYZL1Q6UWQ5 148 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 SS18L2Q9UHA2 77 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 SCRT2Q9NQ03 307 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 IGFBP3P17936 291 aaPredicted RBP13.68□□□□□ -0.22
RIF1-204ENST00000430328 C8orf31Q8N9H6 132 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 NUP35Q8NFH5 326 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 CXCL1P09341 107 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 C3orf79P0CE67 100 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 IGFBP6P24592 240 aaPredicted RBP13.68□□□□□ -0.22
RIF1-204ENST00000430328 SRSF3P84103 164 aaKnown RBP13.68□□□□□ -0.22
RIF1-204ENST00000430328 Q6ZT83 130 aa13.68□□□□□ -0.22
RIF1-204ENST00000430328 MBNL3Q9NUK0 354 aaKnown RBP13.68□□□□□ -0.22
RIF1-204ENST00000430328 PIN1P1O15428 100 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 ZNF138P52744 262 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 FAM90A1Q86YD7 464 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 B5MCH6 92 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 FOXL2P58012 376 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 RNF222A6NCQ9 220 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 PMS2P5A8MQ11 134 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 YPEL1O60688 119 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 YPEL2Q96QA6 119 aa13.67□□□□□ -0.22
RIF1-204ENST00000430328 K7EP13 123 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 NDUFS6O75380 124 aaKnown RBP13.66□□□□□ -0.22
RIF1-204ENST00000430328 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 GAS1P54826 345 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 LINC00477Q96M19 166 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 SMIM2Q9BVW6 85 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 SHISA9B4DS77 424 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 GREM1O60565 184 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 DDX60LQ5H9U9 1706 aaKnown RBP13.66□□□□□ -0.22
RIF1-204ENST00000430328 TRAV13-2A0A0B4J235 113 aa13.66□□□□□ -0.22
RIF1-204ENST00000430328 SAA2-SAA4A0A096LPE2 208 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 SAA2P0DJI9 122 aaPredicted RBP13.65□□□□□ -0.22
RIF1-204ENST00000430328 FOXS1O43638 330 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 RAMP3O60896 148 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 FBLIM1Q8WUP2 373 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 LIME1Q9H400 295 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 GZMMP51124 257 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 F8VVB4 439 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 F8VWA3 439 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 CXCL10P02778 98 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 GREB1Q4ZG55 1949 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 KLHDC3Q9BQ90 382 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 RNF126Q9BV68 326 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
RIF1-204ENST00000430328 EXOC3-AS1Q8N2X6 119 aa13.65□□□□□ -0.23
RIF1-204ENST00000430328 FAM181AQ8N9Y4 354 aa13.65□□□□□ -0.23
RIF1-204ENST00000430328 TMEM243Q9BU79 118 aa13.65□□□□□ -0.23
RIF1-204ENST00000430328 KNCNA6PVL3 124 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 FOXG1P55316 489 aaPredicted RBP13.64□□□□□ -0.23
RIF1-204ENST00000430328 TRAV40A0A0B4J280 105 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 SPAARA0A1B0GVQ0 90 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 KLF5Q13887 457 aaPredicted RBP13.64□□□□□ -0.23
RIF1-204ENST00000430328 MRPL55Q7Z7F7 128 aaKnown RBP13.64□□□□□ -0.23
RIF1-204ENST00000430328 ETDBQ3ZM63 59 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 CELA2AP08217 269 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 PFN2P35080 140 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
RIF1-204ENST00000430328 SRXN1Q9BYN0 137 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 ATAD5Q96QE3 1844 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 MDS2Q8NDY4 140 aa13.64□□□□□ -0.23
RIF1-204ENST00000430328 C14orf178Q8N769 122 aaPredicted RBP13.63□□□□□ -0.23
RIF1-204ENST00000430328 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 GVINP1Q7Z2Y8 2422 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 PLXNB2O15031 1838 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 CGB7P0DN87 165 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 PRCDQ00LT1 54 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 C14orf132Q9NPU4 83 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 A0A0G2JK05 382 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 MP68P56378 58 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 ZNF664Q8N3J9 261 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 BRK1Q8WUW1 75 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 SAP30O75446 220 aa13.63□□□□□ -0.23
RIF1-204ENST00000430328 PRB1P04280 392 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 NRTNQ99748 197 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 A8MWP6 167 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 CTSBP07858 339 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 RGPD4Q7Z3J3 1758 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 FAM104BQ5XKR9 115 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 BMPERQ8N8U9 685 aa13.62□□□□□ -0.23
RIF1-204ENST00000430328 PRB2P02812 416 aaPredicted RBP13.62□□□□□ -0.23
RIF1-204ENST00000430328 PEBP1P30086 187 aaKnown RBP13.62□□□□□ -0.23
RIF1-204ENST00000430328 STPG4Q8N801 248 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms