RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 IGHV4-4A0A075B6R2 117 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 WRBO00258 174 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 PRB4P10163 310 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 SLC25A6P12236 298 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 FAUP35544 74 aaKnown RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 GPX4P36969 197 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 NKX2-1P43699 371 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 TMEM41BQ5BJD5 291 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 NOXA1Q86UR1 476 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 TRGV9Q99603 122 aa8.44□□□□□ -1.06
HDAC4-202ENST00000430200 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 PAIP2BQ9ULR5 123 aaKnown RBP8.44□□□□□ -1.06
HDAC4-202ENST00000430200 CCDC160A6NGH7 325 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 PMS2P5A8MQ11 134 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 SYNGR2O43760 224 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 PSMB3P49720 205 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 AP2S1P53680 142 aaPredicted RBP8.43□□□□□ -1.06
HDAC4-202ENST00000430200 UBE2MP61081 183 aaKnown RBP8.43□□□□□ -1.06
HDAC4-202ENST00000430200 SNRPD3P62318 126 aaKnown RBP8.43□□□□□ -1.06
HDAC4-202ENST00000430200 LINC00052Q96N35 136 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
HDAC4-202ENST00000430200 SEPSECSQ9HD40 501 aaKnown RBP8.43□□□□□ -1.06
HDAC4-202ENST00000430200 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 TRAV10A0A0B4J240 114 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 C9orf170A2RU37 121 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 A8MTW9 85 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 AMBPP02760 352 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 PAX9P55771 341 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 AP3S2P59780 193 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 POLR2GP62487 172 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC4-202ENST00000430200 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 C1orf158Q8N1D5 194 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
HDAC4-202ENST00000430200 PLA2G2EQ9NZK7 142 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 CACFD1Q9UGQ2 172 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 TMED3Q9Y3Q3 217 aa8.42□□□□□ -1.06
HDAC4-202ENST00000430200 A0A0J9YX75 114 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 LINC00854A0A1B0GVQ3 168 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 C11orf94C9JXX5 98 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 NDUFB6O95139 128 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 PRM2P04554 102 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 ANXA7P20073 488 aaKnown RBP8.41□□□□□ -1.06
HDAC4-202ENST00000430200 SPANXN5Q5MJ07 72 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 FAM78BQ5VT40 261 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 RNF182Q8N6D2 247 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 SLC25A22Q9H936 323 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 DOK5Q9P104 306 aa8.41□□□□□ -1.06
HDAC4-202ENST00000430200 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 ZNF98A6NK75 572 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 H3BRN7 92 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 ISLRO14498 428 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 SSSCA1O60232 199 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 NUP62P37198 522 aaPredicted RBP8.4□□□□□ -1.06
HDAC4-202ENST00000430200 EMP1P54849 157 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 ATP5IP56385 69 aaPredicted RBP8.4□□□□□ -1.06
HDAC4-202ENST00000430200 RAB11AP62491 216 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 ID3Q02535 119 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 C1orf194Q5T5A4 169 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 OR8I2Q8N0Y5 310 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 COQ8AQ8NI60 647 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 UHRF2Q96PU4 802 aa8.4□□□□□ -1.06
HDAC4-202ENST00000430200 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
HDAC4-202ENST00000430200 SNRPGP15A8MWD9 76 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 CRXO43186 299 aaPredicted RBP8.39□□□□□ -1.07
HDAC4-202ENST00000430200 ORM2P19652 201 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 S100A5P33763 92 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 AKR1C1Q04828 323 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 ARL16Q0P5N6 197 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 DEDD2Q8WXF8 326 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 PPP1R14BQ96C90 147 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 CLUHP3Q96NS8 147 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 NEU1Q99519 415 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 RNF126Q9BV68 326 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
HDAC4-202ENST00000430200 ZNF701M0R085 212 aaPredicted RBP8.38□□□□□ -1.07
HDAC4-202ENST00000430200 M0R2Z0 102 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 CCSO14618 274 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 MED6O75586 246 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 OR4E1P0C645 316 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 IL7P13232 177 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 TCTAP57738 103 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 RRAS2P62070 204 aaPredicted RBP8.38□□□□□ -1.07
HDAC4-202ENST00000430200 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 OR1B1Q8NGR6 318 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
HDAC4-202ENST00000430200 RSG1Q9BU20 258 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
HDAC4-202ENST00000430200 A0A1B0GVY2 172 aa8.37□□□□□ -1.07
HDAC4-202ENST00000430200 SMCO3A2RU48 225 aa8.37□□□□□ -1.07
HDAC4-202ENST00000430200 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms