RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZNF79Q15937 498 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 OR8I2Q8N0Y5 310 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 OR4B1Q8NGF8 309 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 PPP1R14BQ96C90 147 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 SLC45A2Q9UMX9 530 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 GOLT1BQ9Y3E0 138 aa10.65□□□□□ -0.7
MSH5-208ENST00000429846 IGHV3OR16-12A0A075B7B8 117 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 MED6O75586 246 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 RPP30P78346 268 aaKnown RBP10.64□□□□□ -0.71
MSH5-208ENST00000429846 OXA1LQ15070 435 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 TMEM128Q5BJH2 165 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 LRTM2Q8N967 370 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 THAP8Q8NA92 274 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 CIB3Q96Q77 187 aaPredicted RBP10.64□□□□□ -0.71
MSH5-208ENST00000429846 RPRMQ9NS64 109 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
MSH5-208ENST00000429846 A0A0J9YX75 114 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 A0A1B0GVY2 172 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 FABP12A6NFH5 140 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 IFNA21P01568 189 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 HBE1P02100 147 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 S100A7P31151 101 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 GALR1P47211 349 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 EMP1P54849 157 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 AP3S2P59780 193 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 PSG9Q00887 426 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 LGALS9BQ3B8N2 356 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 FAM222AQ5U5X8 452 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 GGNBP1Q5YKI7 109 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 DEDD2Q8WXF8 326 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 SOSTQ9BQB4 213 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 SCRT1Q9BWW7 348 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 SLIRPQ9GZT3 109 aaKnown RBP10.63□□□□□ -0.71
MSH5-208ENST00000429846 KIAA1109Q2LD37 5005 aa10.63□□□□□ -0.71
MSH5-208ENST00000429846 IGKV1OR2-108A0A075B7D4 117 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 NOL3O60936 208 aaKnown RBP10.62□□□□□ -0.71
MSH5-208ENST00000429846 FXYD7P58549 80 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 DEFB1P60022 68 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 OR2F1Q13607 317 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 FAM78BQ5VT40 261 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 TMED4Q7Z7H5 227 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 GPR82Q96P67 336 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 C7orf50Q9BRJ6 194 aaKnown RBP10.62□□□□□ -0.71
MSH5-208ENST00000429846 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 TMED3Q9Y3Q3 217 aa10.62□□□□□ -0.71
MSH5-208ENST00000429846 LOC102723971A0A1B0GUV8 181 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 A8MTW9 85 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 IAPPP10997 89 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 VAMP1P23763 118 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 TNFSF8P32971 234 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 TOMM5Q8N4H5 51 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 OR4D5Q8NGN0 318 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
MSH5-208ENST00000429846 DOK5Q9P104 306 aa10.61□□□□□ -0.71
MSH5-208ENST00000429846 PAIP2BQ9ULR5 123 aaKnown RBP10.61□□□□□ -0.71
MSH5-208ENST00000429846 PCLOQ9Y6V0 5065 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 PRSS46E5RG02 174 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 RTL8CO15255 209 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 SYNGR2O43760 224 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 MED14OSP0DP75 135 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 RNF212Q495C1 297 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 C1orf158Q8N1D5 194 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 BPIFCQ8NFQ6 507 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 OR1B1Q8NGR6 318 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 MCFD2Q8NI22 146 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 SLC25A32Q9H2D1 315 aa10.6□□□□□ -0.71
MSH5-208ENST00000429846 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
MSH5-208ENST00000429846 ZNF98A6NK75 572 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 F6UB75 175 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 H3BMQ9 156 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 SLC25A22Q9H936 323 aa10.59□□□□□ -0.71
MSH5-208ENST00000429846 M0R2N4 97 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 SFT2D2O95562 160 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 DAD1P61803 113 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 AKR1C1Q04828 323 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 AMTNQ6UX39 209 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 Q6ZR54 194 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 TMEM208Q9BTX3 173 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 TMEM147Q9BVK8 224 aa10.58□□□□□ -0.72
MSH5-208ENST00000429846 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
MSH5-208ENST00000429846 B2MP61769 119 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 PPP1R1AQ13522 171 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 PYDC2Q56P42 97 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 SOHLH1Q5JUK2 328 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
MSH5-208ENST00000429846 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
MSH5-208ENST00000429846 WRBO00258 174 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms