RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NUPL2O15504 423 aaKnown RBP17.14■□□□□ 0.33
VSX1-205ENST00000429762 IGHV3-11P01762 117 aa17.14■□□□□ 0.33
VSX1-205ENST00000429762 BTN1A1Q13410 526 aa17.14■□□□□ 0.33
VSX1-205ENST00000429762 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.14■□□□□ 0.33
VSX1-205ENST00000429762 Q8WTZ3 238 aa17.14■□□□□ 0.33
VSX1-205ENST00000429762 ZNF702PQ9H963 129 aa17.14■□□□□ 0.33
VSX1-205ENST00000429762 TMEM167BQ9NRX6 74 aa17.14■□□□□ 0.33
VSX1-205ENST00000429762 H3BQ15 152 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 H3BTX0 84 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 M0R036 132 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 FCGR2BP31994 310 aaPredicted RBP17.13■□□□□ 0.33
VSX1-205ENST00000429762 TAGLN2P37802 199 aaKnown RBP17.13■□□□□ 0.33
VSX1-205ENST00000429762 CFHR3Q02985 330 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 FAM223BA6NKX1 122 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 SNAPINO95295 136 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 FAM223AQ8IWN6 122 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 FXYD5Q96DB9 178 aa17.13■□□□□ 0.33
VSX1-205ENST00000429762 SCO2A0A1W2PP80 73 aa17.12■□□□□ 0.33
VSX1-205ENST00000429762 NOTCH2Q04721 2471 aa17.12■□□□□ 0.33
VSX1-205ENST00000429762 AWAT1Q58HT5 328 aa17.12■□□□□ 0.33
VSX1-205ENST00000429762 TRBV12-3P01733 135 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 FAM74A3Q4VXF1 159 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 TEX29Q8N6K0 151 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 BLNKQ8WV28 456 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 PRSS22Q9GZN4 317 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 TRBV7-1A0A0A6YYK4 115 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 TGOLN2O43493 480 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 OR2C1O95371 312 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 IGLV1-40P01703 118 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 DERL1Q9BUN8 251 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 NPFFR1Q9GZQ6 430 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 PARLQ9H300 379 aa17.11■□□□□ 0.33
VSX1-205ENST00000429762 ZNF727A8MUV8 499 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 H3BRN7 92 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 GP9P14770 177 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 TMEM88Q6PEY1 159 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 SUN5Q8TC36 379 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 SHANK2-AS3Q9BTD1 123 aa17.1■□□□□ 0.33
VSX1-205ENST00000429762 GGTLC3B5MD39 225 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 TMEM250H0YL14 139 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 SCGB2A1O75556 95 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 SMIM7Q9BQ49 75 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 DNAJC9-AS1A6NH13 148 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 H3BUA1 57 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 NDUFB4O95168 129 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 TOMM20LQ6UXN7 152 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 ZNF600Q6ZNG1 722 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 CBLN2Q8IUK8 224 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 NIPSNAP3BQ9BS92 247 aa17.09■□□□□ 0.33
VSX1-205ENST00000429762 PDE6DO43924 150 aa17.08■□□□□ 0.33
VSX1-205ENST00000429762 RAB9AP51151 201 aa17.08■□□□□ 0.33
VSX1-205ENST00000429762 ESM1Q9NQ30 184 aa17.08■□□□□ 0.33
VSX1-205ENST00000429762 OR5B12Q96R08 314 aa17.08■□□□□ 0.32
VSX1-205ENST00000429762 ZFAND3Q9H8U3 227 aa17.08■□□□□ 0.32
VSX1-205ENST00000429762 RPS10P5Q9NQ39 176 aa17.08■□□□□ 0.32
VSX1-205ENST00000429762 OTOGQ6ZRI0 2925 aa17.07■□□□□ 0.32
VSX1-205ENST00000429762 F6UZH7 168 aa17.07■□□□□ 0.32
VSX1-205ENST00000429762 DNASE2O00115 360 aaPredicted RBP17.07■□□□□ 0.32
VSX1-205ENST00000429762 HNF1AP20823 631 aa17.07■□□□□ 0.32
VSX1-205ENST00000429762 SUMO1P63165 101 aaKnown RBP17.07■□□□□ 0.32
VSX1-205ENST00000429762 CUBNO60494 3623 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 C7orf77A4D0Y5 90 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 ZNF98A6NK75 572 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 ZNF207O43670 478 aaKnown RBP17.06■□□□□ 0.32
VSX1-205ENST00000429762 LY6G6DO95868 133 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 ARL3P36405 182 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 TVP23CQ96ET8 276 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 ZNF580Q9UK33 172 aa17.06■□□□□ 0.32
VSX1-205ENST00000429762 RANP62826 216 aaKnown RBP17.06■□□□□ 0.32
VSX1-205ENST00000429762 Q71RC1 249 aaPredicted RBP17.06■□□□□ 0.32
VSX1-205ENST00000429762 GAR1Q9NY12 217 aaKnown RBP17.06■□□□□ 0.32
VSX1-205ENST00000429762 BRI3O95415 125 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 IGHG4P01861 327 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 NBEAP1P0C6P0 100 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 CRYBB3P26998 211 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 RPL15P61313 204 aaKnown RBP17.05■□□□□ 0.32
VSX1-205ENST00000429762 STXBP6Q8NFX7 210 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 OR4X2Q8NGF9 303 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 USMG5Q96IX5 58 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 ZNF586Q9NXT0 402 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 RABAC1Q9UI14 185 aa17.05■□□□□ 0.32
VSX1-205ENST00000429762 A0A1W2PRE2 83 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 PSMB8P28062 276 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 C17orf77Q96MU5 243 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 TXNDC17Q9BRA2 123 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 FAM181BA6NEQ2 426 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 ZNF343Q6P1L6 599 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 SDF2L1Q9HCN8 221 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 AURKAIP1Q9NWT8 199 aaPredicted RBP17.04■□□□□ 0.32
VSX1-205ENST00000429762 ARL2-SNX15V9GYD0 113 aa17.04■□□□□ 0.32
VSX1-205ENST00000429762 IGHV3OR16-13A0A075B7E8 117 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 IGHV3-49A0A0A0MS15 119 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 IGHV3-74A0A0B4J1X5 117 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 IGHV3-66A0A0C4DH42 116 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 PGPEP1LA6NFU8 196 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 TMEM86BQ8N661 226 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 TMEM14CQ9P0S9 112 aa17.03■□□□□ 0.32
VSX1-205ENST00000429762 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.02■□□□□ 0.32
VSX1-205ENST00000429762 CLPSL1A2RUU4 121 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms