RNA–Protein interactions for RNA: ENST00000427716.6

FGD4-202, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FGD4, Length 8,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-202ENST00000427716 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 H3BUT2 72 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 PRSS8Q16651 343 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 C9orf139Q6ZV77 190 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
FGD4-202ENST00000427716 IGLC2P0DOY2 106 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 ZNRF1Q8ND25 227 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 VSIRQ9H7M9 311 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 SDK2Q58EX2 2172 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 MED12LQ86YW9 2145 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 LYPD6Q86Y78 171 aa6.32□□□□□ -1.4
FGD4-202ENST00000427716 CCL8P80075 99 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 Q86TA4 180 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 C18orf32Q8TCD1 76 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 ATP6V0BQ99437 205 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 RNASE2P10153 161 aaKnown RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 MORN3Q6PF18 240 aaPredicted RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 UBTD1Q9HAC8 227 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 NDUFA4L2Q9NRX3 87 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 ZNF407Q9C0G0 2248 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 PCDH15Q96QU1 1955 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 IGHV1-18A0A0C4DH31 117 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 EFNA2O43921 213 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 TSPAN13O95857 204 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 FOXF2Q12947 444 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 MDS2Q8NDY4 140 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 DOCK7Q96N67 2140 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 ANAPC13Q9BS18 74 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 SNHG12Q9BXW3 62 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 TMEM8BA6NDV4 472 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 MBD3L4A6NDZ8 208 aaPredicted RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 MBD3L3A6NE82 208 aaPredicted RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 MBD3L5A6NJ08 208 aaPredicted RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 IGHV3-7P01780 117 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 NTF4P34130 210 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 RPL15P61313 204 aaKnown RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 TPRX1Q8N7U7 411 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 MBD3L2Q8NHZ7 208 aaPredicted RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 TNFRSF18Q9Y5U5 241 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 RNASE6Q93091 150 aaKnown RBP6.31□□□□□ -1.4
FGD4-202ENST00000427716 CST9LQ9H4G1 147 aa6.31□□□□□ -1.4
FGD4-202ENST00000427716 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 K7EP34 96 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 DSCR9P59020 149 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 DPH3P1Q9H4G8 78 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 RAI1Q7Z5J4 1906 aaPredicted RBP6.3□□□□□ -1.4
FGD4-202ENST00000427716 TMSB15BA0A087X1C1 80 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 H3BQ85 93 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 VCYO14598 125 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 ZNF138P52744 262 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 KIR3DS1Q14943 382 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 RFNGQ9Y644 331 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 DDB2Q92466 427 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 ZNF56Q15929 161 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 TEX36Q5VZQ5 186 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 DEFB124Q8NES8 71 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
FGD4-202ENST00000427716 A0A087WV48 116 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 CEACAM4O75871 244 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 CSRP2Q16527 193 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 TMEM155Q4W5P6 130 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
FGD4-202ENST00000427716 C9JQL5 133 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 TMEM256Q8N2U0 113 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 ZNF837Q96EG3 531 aaPredicted RBP6.3□□□□□ -1.4
FGD4-202ENST00000427716 SLC25A15Q9Y619 301 aa6.3□□□□□ -1.4
FGD4-202ENST00000427716 INTS1Q8N201 2190 aaKnown RBP6.29□□□□□ -1.4
FGD4-202ENST00000427716 FOXA3P55318 350 aaPredicted RBP6.29□□□□□ -1.4
FGD4-202ENST00000427716 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 IGFBPL1Q8WX77 278 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 TFF2Q03403 129 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 IL17RELQ6ZVW7 336 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 FAM90A27PA6NNH2 459 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 MNX1P50219 401 aaPredicted RBP6.29□□□□□ -1.4
FGD4-202ENST00000427716 PLAURQ03405 335 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 GUSBP1Q15486 140 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 RRN3P1Q2M238 152 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 TRAV8-6A0A0B4J262 113 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 TMEM178BH3BS89 294 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 CKS1BP61024 79 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 NPIPB5A8MRT5 1133 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 EGR1P18146 543 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 BSPH1Q075Z2 132 aa6.29□□□□□ -1.4
FGD4-202ENST00000427716 TMEM170BQ5T4T1 132 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms