RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SIGLEC9Q9Y336 463 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 LY96Q9Y6Y9 160 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 H7C1H1 209 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 IGLV3-1P01715 115 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 FBLN7Q53RD9 439 aa16.08■□□□□ 0.16
HCG18-235ENST00000426882 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.07■□□□□ 0.16
HCG18-235ENST00000426882 HBDP02042 147 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 PRR31Q5SQ13 230 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 DENND4CQ5VZ89 1909 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 IGKV1-39P01597 117 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 IGKV1D-39P04432 117 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 ZNRD1Q9P1U0 126 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 C15orf32Q32M92 178 aa16.07■□□□□ 0.16
HCG18-235ENST00000426882 TRAV40A0A0B4J280 105 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 PAX1P15863 534 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 VMO1Q7Z5L0 202 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 NEUROG1Q92886 237 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 BUB1B-PAK6H3BSN5 160 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 ITGB1BP1O14713 200 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 RPL15P61313 204 aaKnown RBP16.06■□□□□ 0.16
HCG18-235ENST00000426882 TNFRSF18Q9Y5U5 241 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 ERVK11-1P61568 191 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 RPRMLQ8N4K4 120 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 PSMG4Q5JS54 123 aa16.06■□□□□ 0.16
HCG18-235ENST00000426882 IGKV2-40A0A087WW87 121 aaPredicted RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 SMAD7O15105 426 aaKnown RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 NPFFO15130 113 aa16.05■□□□□ 0.16
HCG18-235ENST00000426882 IGKV2D-40P01614 121 aaPredicted RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 PPBPP02775 128 aa16.05■□□□□ 0.16
HCG18-235ENST00000426882 CIRBPQ14011 172 aaKnown RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 C5orf64Q2M2E5 130 aa16.05■□□□□ 0.16
HCG18-235ENST00000426882 CHCHD1Q96BP2 118 aaKnown RBP16.05■□□□□ 0.16
HCG18-235ENST00000426882 DOCK11Q5JSL3 2073 aa16.05■□□□□ 0.16
HCG18-235ENST00000426882 PAX8Q06710 450 aa16.05■□□□□ 0.16
HCG18-235ENST00000426882 LY6HO94772 140 aa16.04■□□□□ 0.16
HCG18-235ENST00000426882 PSMB11A5LHX3 300 aa16.04■□□□□ 0.16
HCG18-235ENST00000426882 FNDC10F2Z333 226 aa16.04■□□□□ 0.16
HCG18-235ENST00000426882 EFNA4P52798 201 aa16.04■□□□□ 0.16
HCG18-235ENST00000426882 ITLN2Q8WWU7 325 aaPredicted RBP16.04■□□□□ 0.16
HCG18-235ENST00000426882 RNF166Q96A37 237 aaPredicted RBP16.04■□□□□ 0.16
HCG18-235ENST00000426882 NXT2Q9NPJ8 142 aaKnown RBP16.04■□□□□ 0.16
HCG18-235ENST00000426882 ZNF256Q9Y2P7 627 aaPredicted RBP16.04■□□□□ 0.16
HCG18-235ENST00000426882 TRAV21A0A0B4J279 112 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 NDUFA3O95167 84 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 COL8A2P25067 703 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 CACNG7P62955 275 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 TRAV8-1A0A0A6YYK1 113 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 IGKV3OR2-268A0A0C4DH90 116 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 TNFSF13O75888 250 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 MEIG1Q5JSS6 88 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 CD7P09564 240 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 OOSP1A8MZH6 123 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 SAMD13Q5VXD3 122 aa16.03■□□□□ 0.16
HCG18-235ENST00000426882 TRAV41A0A0B4J266 112 aa16.02■□□□□ 0.16
HCG18-235ENST00000426882 NUTF2P61970 127 aaKnown RBP16.02■□□□□ 0.16
HCG18-235ENST00000426882 NUP35Q8NFH5 326 aa16.02■□□□□ 0.16
HCG18-235ENST00000426882 YLPM1P49750 1951 aaKnown RBP16.02■□□□□ 0.16
HCG18-235ENST00000426882 MINOS1Q5TGZ0 78 aa16.02■□□□□ 0.16
HCG18-235ENST00000426882 TMEM219Q86XT9 240 aa16.02■□□□□ 0.16
HCG18-235ENST00000426882 MINOS1-NBL1R4GNA1 71 aa16.02■□□□□ 0.16
HCG18-235ENST00000426882 E7EQL1 145 aa16.02■□□□□ 0.15
HCG18-235ENST00000426882 SUMO2P61956 95 aaKnown RBP16.02■□□□□ 0.15
HCG18-235ENST00000426882 EVI2AP22794 236 aa16.02■□□□□ 0.15
HCG18-235ENST00000426882 RASL11AQ6T310 242 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 LINC00479Q96M42 142 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 BEX4Q9NWD9 120 aaPredicted RBP16.01■□□□□ 0.15
HCG18-235ENST00000426882 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 LINC00469Q8N7U9 141 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 NPFFR1Q9GZQ6 430 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 MRPL16Q9NX20 251 aaKnown RBP16.01■□□□□ 0.15
HCG18-235ENST00000426882 A0A1W2PPI3 338 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 IL15RAQ13261 267 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 TMEM14BQ9NUH8 114 aa16.01■□□□□ 0.15
HCG18-235ENST00000426882 FAM181BA6NEQ2 426 aa16■□□□□ 0.15
HCG18-235ENST00000426882 F2Z2F3 143 aa16■□□□□ 0.15
HCG18-235ENST00000426882 OR4X2Q8NGF9 303 aa16■□□□□ 0.15
HCG18-235ENST00000426882 IFI27L1Q96BM0 104 aa16■□□□□ 0.15
HCG18-235ENST00000426882 MOB4Q9Y3A3 225 aa16■□□□□ 0.15
HCG18-235ENST00000426882 GTF3C1Q12789 2109 aa16■□□□□ 0.15
HCG18-235ENST00000426882 CD33P20138 364 aa16■□□□□ 0.15
HCG18-235ENST00000426882 PCNX2A6NKB5 2137 aa16■□□□□ 0.15
HCG18-235ENST00000426882 ZNF726P1Q15940 193 aa16■□□□□ 0.15
HCG18-235ENST00000426882 C1orf194Q5T5A4 169 aa16■□□□□ 0.15
HCG18-235ENST00000426882 SIGLEC15Q6ZMC9 328 aa16■□□□□ 0.15
HCG18-235ENST00000426882 M0R1W7 72 aa15.99■□□□□ 0.15
HCG18-235ENST00000426882 GATA4P43694 442 aa15.99■□□□□ 0.15
HCG18-235ENST00000426882 SRSF1Q07955 248 aaKnown RBP eCLIP15.99■□□□□ 0.153e-10■■■□□ 17.2
HCG18-235ENST00000426882 TMEM190Q8WZ59 177 aa15.99■□□□□ 0.15
HCG18-235ENST00000426882 PFN1P07737 140 aaKnown RBP15.99■□□□□ 0.15
HCG18-235ENST00000426882 DUX4L9Q6RFH8 374 aaPredicted RBP15.99■□□□□ 0.15
HCG18-235ENST00000426882 PRSS22Q9GZN4 317 aa15.99■□□□□ 0.15
HCG18-235ENST00000426882 NCR2O95944 276 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 LYZL1Q6UWQ5 148 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 SPCS1Q9Y6A9 102 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 PLXNB3Q9ULL4 1909 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 LINC01587Q99440 93 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 ST20Q9HBF5 79 aa15.98■□□□□ 0.15
HCG18-235ENST00000426882 VDAC2P45880 294 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms