RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 LSM5Q9Y4Y9 91 aaKnown RBP12.71□□□□□ -0.38
LMCD1-204ENST00000426878 SMCO3A2RU48 225 aa12.7□□□□□ -0.38
LMCD1-204ENST00000426878 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
LMCD1-204ENST00000426878 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
LMCD1-204ENST00000426878 ARL16Q0P5N6 197 aa12.7□□□□□ -0.38
LMCD1-204ENST00000426878 CYP2G1PQ6ZSU1 146 aa12.7□□□□□ -0.38
LMCD1-204ENST00000426878 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
LMCD1-204ENST00000426878 MGAT4CQ9UBM8 478 aa12.7□□□□□ -0.38
LMCD1-204ENST00000426878 ZNF688P0C7X2 276 aa12.69□□□□□ -0.38
LMCD1-204ENST00000426878 GATA2P23769 480 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-204ENST00000426878 S100A7P31151 101 aa12.69□□□□□ -0.38
LMCD1-204ENST00000426878 RRAS2P62070 204 aaPredicted RBP12.69□□□□□ -0.38
LMCD1-204ENST00000426878 RAB32Q13637 225 aa12.69□□□□□ -0.38
LMCD1-204ENST00000426878 TEPPQ6URK8 271 aa12.69□□□□□ -0.38
LMCD1-204ENST00000426878 PLP1P60201 277 aa12.68□□□□□ -0.38
LMCD1-204ENST00000426878 LEMD1Q68G75 181 aa12.68□□□□□ -0.38
LMCD1-204ENST00000426878 RNF183Q96D59 192 aa12.68□□□□□ -0.38
LMCD1-204ENST00000426878 LYRM2Q9NU23 88 aaPredicted RBP12.68□□□□□ -0.38
LMCD1-204ENST00000426878 SPRY2O43597 315 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 ORM2P19652 201 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 BCAP31P51572 246 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 CAV2P51636 162 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
LMCD1-204ENST00000426878 OR8I2Q8N0Y5 310 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 PPP1R14BQ96C90 147 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 TMEM147Q9BVK8 224 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 NMES1Q9C002 83 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 CSMD3Q7Z407 3707 aa12.67□□□□□ -0.38
LMCD1-204ENST00000426878 FAM24AA6NFZ4 105 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 GOSR2O14653 212 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 S100A10P60903 97 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
LMCD1-204ENST00000426878 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 STHQ8IWL8 128 aa12.66□□□□□ -0.38
LMCD1-204ENST00000426878 CST7O76096 145 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 LYL1P12980 280 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 SULT1A1P50225 295 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 TRPT1Q86TN4 253 aaKnown RBP12.65□□□□□ -0.38
LMCD1-204ENST00000426878 OR1B1Q8NGR6 318 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 GPR82Q96P67 336 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 AGRNO00468 2067 aa12.65□□□□□ -0.38
LMCD1-204ENST00000426878 KMT2CQ8NEZ4 4911 aaKnown RBP12.64□□□□□ -0.39
LMCD1-204ENST00000426878 SOCS3O14543 225 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 HYPMO75409 117 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 SIX6O95475 246 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 LINC00869P0C866 280 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 S100A11P31949 105 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 VWC2Q2TAL6 325 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 CASC10Q5T4H9 136 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 PXDC1Q5TGL8 231 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 S100A7AQ86SG5 101 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 ZNF546Q86UE3 836 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 TMEM252Q8N6L7 170 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
LMCD1-204ENST00000426878 H3BRN7 92 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 AGPAT2O15120 278 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 GALR1P47211 349 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 MEOX2P50222 304 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 RAP2BP61225 183 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 STX12Q86Y82 276 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
LMCD1-204ENST00000426878 SLC25A32Q9H2D1 315 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 UQCC1Q9NVA1 299 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 HIGD1AQ9Y241 93 aa12.63□□□□□ -0.39
LMCD1-204ENST00000426878 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 ISLRO14498 428 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 PTTG1O95997 202 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 RLN2P04090 185 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 SPP1P10451 314 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 ID1P41134 155 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 PSMB3P49720 205 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 H2BFSP57053 126 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 HBG1P69891 147 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 HBG2P69892 147 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 ATP6V1FQ16864 119 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 ACTL10Q5JWF8 245 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
LMCD1-204ENST00000426878 TMEM217Q8N7C4 229 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 MGST2Q99735 147 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 E5RGE8 158 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 SSNA1O43805 119 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
LMCD1-204ENST00000426878 RAB31Q13636 194 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 ARL6Q9H0F7 186 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 SLC25A22Q9H936 323 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 DOK5Q9P104 306 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 RNF24Q9Y225 148 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 WDR83OSQ9Y284 106 aa12.62□□□□□ -0.39
LMCD1-204ENST00000426878 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
LMCD1-204ENST00000426878 OR5G3P0C626 314 aa12.61□□□□□ -0.39
LMCD1-204ENST00000426878 PATE2Q6UY27 113 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms