RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 GSKIPQ9P0R6 139 aa10.07□□□□□ -0.8
SNX3-204ENST00000426155 TMA7Q9Y2S6 64 aaKnown RBP10.07□□□□□ -0.8
SNX3-204ENST00000426155 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
SNX3-204ENST00000426155 FAM25EA8MYX2 175 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 DEFB131AP59861 70 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 LYZP61626 148 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 PAFAH1B2P68402 229 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
SNX3-204ENST00000426155 DEFB135Q30KP9 77 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 TEX261Q6UWH6 196 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 LRRC20Q8TCA0 184 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
SNX3-204ENST00000426155 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 K7EQG2 157 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 BUB3O43684 328 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 MBPP02686 304 aaPredicted RBP10.05□□□□□ -0.8
SNX3-204ENST00000426155 CD5P06127 495 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 METTL15P1P0C7V9 234 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 ZNF688P0C7X2 276 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 GATA2P23769 480 aaPredicted RBP10.05□□□□□ -0.8
SNX3-204ENST00000426155 AKR1C1Q04828 323 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 CLLU1Q5K131 121 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 ZFAND6Q6FIF0 208 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 TMEM182Q6ZP80 229 aaPredicted RBP10.05□□□□□ -0.8
SNX3-204ENST00000426155 C12orf45Q8N5I9 185 aaPredicted RBP10.05□□□□□ -0.8
SNX3-204ENST00000426155 THAP8Q8NA92 274 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 DCANP1Q8TF63 244 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
SNX3-204ENST00000426155 TRAV2A0A0B4J234 112 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 SMCO3A2RU48 225 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 TSC22D2O75157 780 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 APOC4P55056 127 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 FCN2Q15485 313 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 ZNF680Q8NEM1 530 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 SMIM8Q96KF7 97 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 TRGV9Q99603 122 aa10.04□□□□□ -0.8
SNX3-204ENST00000426155 LSM5Q9Y4Y9 91 aaKnown RBP10.04□□□□□ -0.8
SNX3-204ENST00000426155 C5orf51A6NDU8 294 aa10.03□□□□□ -0.8
SNX3-204ENST00000426155 CASC10Q5T4H9 136 aa10.03□□□□□ -0.8
SNX3-204ENST00000426155 SIGLEC15Q6ZMC9 328 aa10.03□□□□□ -0.8
SNX3-204ENST00000426155 GPN1Q9HCN4 374 aaPredicted RBP10.03□□□□□ -0.8
SNX3-204ENST00000426155 SACSQ9NZJ4 4579 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 HELTA6NFD8 242 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 KNCNA6PVL3 124 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 K7EPK0 472 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 SSNA1O43805 119 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 ARL16Q0P5N6 197 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 RAB40CQ96S21 281 aa10.02□□□□□ -0.81
SNX3-204ENST00000426155 TENM2Q9NT68 2774 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 KIR2DL5BA0A0G2JN68 375 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 KIR2DL5BA0A0G2JPC4 375 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 LOC105371267A0A1B0GV96 52 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 SNRPGP15A8MWD9 76 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 FABP1P07148 127 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 LYL1P12980 280 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 CMC4P56277 68 aaPredicted RBP10.01□□□□□ -0.81
SNX3-204ENST00000426155 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 TOR2AQ5JU69 321 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 KIR2DL5AQ8N109 375 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 KIR2DL5BQ8NHK3 375 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 DOK5Q9P104 306 aa10.01□□□□□ -0.81
SNX3-204ENST00000426155 LYSTQ99698 3801 aa10□□□□□ -0.81
SNX3-204ENST00000426155 RYR2Q92736 4967 aa10□□□□□ -0.81
SNX3-204ENST00000426155 SPRY2O43597 315 aa10□□□□□ -0.81
SNX3-204ENST00000426155 SIX6O95475 246 aa10□□□□□ -0.81
SNX3-204ENST00000426155 IL5P05113 134 aa10□□□□□ -0.81
SNX3-204ENST00000426155 TAS2R30P59541 319 aa10□□□□□ -0.81
SNX3-204ENST00000426155 DEFB1P60022 68 aa10□□□□□ -0.81
SNX3-204ENST00000426155 S100A10P60903 97 aa10□□□□□ -0.81
SNX3-204ENST00000426155 DLK1P80370 383 aa10□□□□□ -0.81
SNX3-204ENST00000426155 EWSR1Q01844 656 aaKnown RBP eCLIP10□□□□□ -0.81
SNX3-204ENST00000426155 Q6ZWC4 215 aa10□□□□□ -0.81
SNX3-204ENST00000426155 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
SNX3-204ENST00000426155 SLC51BQ86UW2 128 aa10□□□□□ -0.81
SNX3-204ENST00000426155 RNF183Q96D59 192 aa10□□□□□ -0.81
SNX3-204ENST00000426155 C2orf50Q96LR7 162 aa10□□□□□ -0.81
SNX3-204ENST00000426155 C11orf1Q9H5F2 150 aa10□□□□□ -0.81
SNX3-204ENST00000426155 NRN1Q9NPD7 142 aa10□□□□□ -0.81
SNX3-204ENST00000426155 L7N2F9 121 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
SNX3-204ENST00000426155 ORM2P19652 201 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 RAP2BP61225 183 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 VAMP2P63027 116 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 SLC38A11Q08AI6 406 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 RAB32Q13637 225 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 CYP2G1PQ6ZSU1 146 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 COMMD7Q86VX2 200 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 STHQ8IWL8 128 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 OR11H7Q8NGC8 314 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 OR10P1Q8NGE3 313 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 OR1B1Q8NGR6 318 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 ASB13Q8WXK3 278 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 CSTL1Q9H114 145 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 SLC25A32Q9H2D1 315 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 SLC25A22Q9H936 323 aa9.99□□□□□ -0.81
SNX3-204ENST00000426155 MED9Q9NWA0 146 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms