RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 H3BTX0 84 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
FN1-208ENST00000426059 CBLN2Q8IUK8 224 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 SMR3AQ99954 134 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 SLC25A39Q9BZJ4 359 aaPredicted RBP13.5□□□□□ -0.25
FN1-208ENST00000426059 OR51M1Q9H341 326 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 YAE1D1Q9NRH1 226 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 OTOGQ6ZRI0 2925 aa13.5□□□□□ -0.25
FN1-208ENST00000426059 AP4M1O00189 453 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 PARLQ9H300 379 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 GNB4Q9HAV0 340 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
FN1-208ENST00000426059 MTORP42345 2549 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 ZNF727A8MUV8 499 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 TPPP2P59282 170 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
FN1-208ENST00000426059 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 C10orf99Q6UWK7 81 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 NIPSNAP3BQ9BS92 247 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 RPS10P5Q9NQ39 176 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 TMEM167BQ9NRX6 74 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
FN1-208ENST00000426059 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 ZNF98A6NK75 572 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 NDUFB4O95168 129 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 PF4V1P10720 104 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 SRP14P37108 136 aaKnown RBP13.48□□□□□ -0.25
FN1-208ENST00000426059 TAGLN2P37802 199 aaKnown RBP13.48□□□□□ -0.25
FN1-208ENST00000426059 ATP5G2Q06055 141 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 Q8WTZ3 238 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 NF1P21359 2839 aa13.48□□□□□ -0.25
FN1-208ENST00000426059 WI2-2373I1.2A0A1W2PRP0 233 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 FABP1P07148 127 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 FXYD5Q96DB9 178 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 ZNF414Q96IQ9 312 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 C7orf77A4D0Y5 90 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 TMEM250H0YL14 139 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 IGHV3-11P01762 117 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 FCGR2BP31994 310 aaPredicted RBP13.47□□□□□ -0.25
FN1-208ENST00000426059 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
FN1-208ENST00000426059 GGTLC3B5MD39 225 aa13.46□□□□□ -0.25
FN1-208ENST00000426059 CD5LO43866 347 aa13.46□□□□□ -0.25
FN1-208ENST00000426059 SUMO1P63165 101 aaKnown RBP13.46□□□□□ -0.25
FN1-208ENST00000426059 TXN2Q99757 166 aa13.46□□□□□ -0.25
FN1-208ENST00000426059 AKR1D1P51857 326 aa13.46□□□□□ -0.25
FN1-208ENST00000426059 PRDM13Q9H4Q3 707 aa13.46□□□□□ -0.25
FN1-208ENST00000426059 PDE6DO43924 150 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 OR2C1O95371 312 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 TRBV12-3P01733 135 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 RPL35P42766 123 aaKnown RBP13.45□□□□□ -0.26
FN1-208ENST00000426059 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 MLXQ9UH92 298 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 GP9P14770 177 aa13.45□□□□□ -0.26
FN1-208ENST00000426059 RANP62826 216 aaKnown RBP13.45□□□□□ -0.26
FN1-208ENST00000426059 AURKAIP1Q9NWT8 199 aaPredicted RBP13.45□□□□□ -0.26
FN1-208ENST00000426059 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 ZNF600Q6ZNG1 722 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 ANK3Q12955 4377 aaKnown RBP13.44□□□□□ -0.26
FN1-208ENST00000426059 TRBV7-1A0A0A6YYK4 115 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 FAM223BA6NKX1 122 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 H3BRN7 92 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 TGOLN2O43493 480 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 CRYBB3P26998 211 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 CFHR3Q02985 330 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 TOMM20LQ6UXN7 152 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 FAM223AQ8IWN6 122 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
FN1-208ENST00000426059 IGLV1-40P01703 118 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 PRB4P10163 310 aaPredicted RBP13.43□□□□□ -0.26
FN1-208ENST00000426059 C12orf57Q99622 126 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 RAB9AP51151 201 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 C17orf77Q96MU5 243 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 ELOVL1Q9BW60 279 aa13.43□□□□□ -0.26
FN1-208ENST00000426059 F6UZH7 168 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 ZNF207O43670 478 aaKnown RBP13.42□□□□□ -0.26
FN1-208ENST00000426059 ADIRFQ15847 76 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 TMEM241Q24JQ0 296 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 ISOC2Q96AB3 205 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 A0A1W2PRE2 83 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 SCGB2A1O75556 95 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 RPL15P61313 204 aaKnown RBP13.42□□□□□ -0.26
FN1-208ENST00000426059 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 TXNDC17Q9BRA2 123 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 ZNF586Q9NXT0 402 aa13.42□□□□□ -0.26
FN1-208ENST00000426059 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
FN1-208ENST00000426059 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
FN1-208ENST00000426059 HNF1AP20823 631 aa13.41□□□□□ -0.26
FN1-208ENST00000426059 NPFFR1Q9GZQ6 430 aa13.41□□□□□ -0.26
FN1-208ENST00000426059 ZFAND3Q9H8U3 227 aa13.41□□□□□ -0.26
FN1-208ENST00000426059 NAT8Q9UHE5 227 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms