RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 ASCL5Q7RTU5 278 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 FAM168AQ92567 244 aa10.49□□□□□ -0.73
COL12A1-205ENST00000425443 ANKHD1Q8IWZ3 2542 aaKnown RBP10.48□□□□□ -0.73
COL12A1-205ENST00000425443 DCHS2Q6V1P9 2916 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 H0YJW9 148 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 H3BTX0 84 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 SRSF8Q9BRL6 282 aaKnown RBP10.48□□□□□ -0.73
COL12A1-205ENST00000425443 UQCR10Q9UDW1 63 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 TNFRSF18Q9Y5U5 241 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 NTF3P20783 257 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 TPPP2P59282 170 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 SSX8Q7RTT4 187 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 PTPRQQ9UMZ3 2332 aa10.48□□□□□ -0.73
COL12A1-205ENST00000425443 CD3EP07766 207 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 AREGP15514 252 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
COL12A1-205ENST00000425443 RHOGP84095 191 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
COL12A1-205ENST00000425443 SNAI2O43623 268 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 HYPMO75409 117 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 USF1P22415 310 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-205ENST00000425443 TAS2R45P59539 299 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 TIGITQ495A1 244 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 C2orf83Q53S99 150 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 HCP5Q6MZN7 132 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 FAM19A2Q8N3H0 131 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 IGHV1-69-2A0A0G2JMI3 117 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 E7EQL1 145 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 M0QXV9 152 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 OR5AU1Q8NGC0 362 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 NPIPB3Q92617 1050 aa10.47□□□□□ -0.73
COL12A1-205ENST00000425443 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-205ENST00000425443 FAM90A27PA6NNH2 459 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 ZNF207O43670 478 aaKnown RBP10.46□□□□□ -0.73
COL12A1-205ENST00000425443 RNASE2P10153 161 aaKnown RBP10.46□□□□□ -0.73
COL12A1-205ENST00000425443 PPOXP50336 477 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 SUB1P53999 127 aaKnown RBP eCLIP10.46□□□□□ -0.73
COL12A1-205ENST00000425443 OR5AN1Q8NGI8 311 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 TPSG1Q9NRR2 321 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 TMEM167BQ9NRX6 74 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 CTSZQ9UBR2 303 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 WASHC3Q9Y3C0 194 aa10.46□□□□□ -0.73
COL12A1-205ENST00000425443 DLL1O00548 723 aa10.46□□□□□ -0.74
COL12A1-205ENST00000425443 MOSP00540 346 aa10.46□□□□□ -0.74
COL12A1-205ENST00000425443 ATP5IP56385 69 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-205ENST00000425443 CD69Q07108 199 aa10.46□□□□□ -0.74
COL12A1-205ENST00000425443 VMA21Q3ZAQ7 101 aa10.46□□□□□ -0.74
COL12A1-205ENST00000425443 IGF2BP2-AS1Q96M15 143 aa10.46□□□□□ -0.74
COL12A1-205ENST00000425443 FNDC10F2Z333 226 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 FCN3O75636 299 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 ORM2P19652 201 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 CX3CL1P78423 397 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 Q0VG73 95 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 RUSC1-AS1Q66K80 236 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 PDPNQ86YL7 162 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 LINC01560Q8TB33 94 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 SHISA9B4DS77 424 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 LYNX1G3V0Z9 82 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 GPX1P07203 203 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 LYNX1P0DP58 116 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 ST6GALNAC6Q969X2 333 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 RITA1Q96K30 269 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 ZNF835Q9Y2P0 537 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 LY96Q9Y6Y9 160 aa10.45□□□□□ -0.74
COL12A1-205ENST00000425443 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 BMPR1BO00238 502 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 COX7A2P2O60397 106 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 LOXP28300 417 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 C19orf24Q9BVV8 132 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 GNB1LQ9BYB4 327 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 COL12A1Q99715 3063 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 A0A1W2PS18 150 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 K7ENP7 123 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 GNG5P63218 68 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 FAM167A-AS1Q96KT0 104 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 PSG8Q9UQ74 426 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 TRAV9-1A0A075B6T8 112 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 PSMB11A5LHX3 300 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 RPL24P83731 157 aaKnown RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 NAA38Q9BRA0 125 aaKnown RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 ZNF355PQ9NSJ1 428 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
COL12A1-205ENST00000425443 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
COL12A1-205ENST00000425443 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.43□□□□□ -0.74
COL12A1-205ENST00000425443 IGHV1-8P0DP01 117 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 SCGB1A1P11684 91 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 SRIP30626 198 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 WT1-ASQ06250 92 aa10.43□□□□□ -0.74
COL12A1-205ENST00000425443 GTF2H5Q6ZYL4 71 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms